Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D07
         (209 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   1.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   1.8  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    20   3.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   3.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    19   4.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    19   5.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        19   7.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    19   7.2  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 179 NNSLNHWERD 208
           NNS NHW ++
Sbjct: 382 NNSNNHWRKN 391


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 5   RGAIAPPEDENNKWVRAFRKENSD*NKTKLNFSKTKHLKA 124
           RG+  P   E+    +  +  N+D +   L FS    LKA
Sbjct: 99  RGSSTPESPEHYYNQKTLQANNNDASNGNLKFSIDNILKA 138


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -2

Query: 88  GFISI*VFLPKSTYPFIVFVLWWCN 14
           G+  I +++P      I +V +W N
Sbjct: 68  GYYLIQIYIPSGLIVIISWVSFWLN 92


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 151 EMVIDSDNYEQFFE 192
           E+  D D Y++F+E
Sbjct: 415 ELAEDKDGYKKFYE 428


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 46  PFIVFVLW 23
           PF VF+LW
Sbjct: 305 PFRVFILW 312


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 96  LSLVLFQSEFSFLKARTHLL 37
           L   +FQ  F+ +   THLL
Sbjct: 76  LKYAIFQKNFTNIVNLTHLL 95


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 157 PFQVHLLIIANCFQVF 110
           P  + L  +  CFQVF
Sbjct: 196 PTSIDLNAVRLCFQVF 211


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 145 HLLIIANCF 119
           HLL IAN F
Sbjct: 196 HLLFIANAF 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,806
Number of Sequences: 336
Number of extensions: 727
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  2579160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)