Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_D07
(209 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 21 2.1
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 20 3.7
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 20 3.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 20 3.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 20 3.7
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 19 4.9
AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 19 4.9
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 19 6.4
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 19 6.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 19 6.4
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 19 6.4
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 19 6.4
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 19 8.5
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 19 8.5
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 20.6 bits (41), Expect = 2.1
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 166 SDNYEQFFESLGTG 207
S+N++ F ++LG G
Sbjct: 14 SENFDDFMKALGVG 27
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 19.8 bits (39), Expect = 3.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 109 ETLESNSQLLTSEPEMVID 165
++LE+ S L EP +ID
Sbjct: 38 QSLEARSADLVPEPRYIID 56
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.8 bits (39), Expect = 3.7
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = -2
Query: 88 GFISI*VFLPKSTYPFIVFVLWWCN 14
G+ I +++P I +V +W N
Sbjct: 221 GYYLIQIYIPSGLIVIISWVSFWLN 245
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.8 bits (39), Expect = 3.7
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = -2
Query: 88 GFISI*VFLPKSTYPFIVFVLWWCN 14
G+ I +++P I +V +W N
Sbjct: 221 GYYLIQIYIPSGLIVIISWVSFWLN 245
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 19.8 bits (39), Expect = 3.7
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = -2
Query: 88 GFISI*VFLPKSTYPFIVFVLWWCN 14
G+ I +++P I +V +W N
Sbjct: 160 GYYLIQIYIPSGLIVIISWVSFWLN 184
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 19.4 bits (38), Expect = 4.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 161 SIQIITNNSLNHW 199
SI+IIT L +W
Sbjct: 4 SIKIITTTGLENW 16
>AB023025-1|BAA74592.1| 133|Apis mellifera actin protein.
Length = 133
Score = 19.4 bits (38), Expect = 4.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2
Query: 14 IAPPEDENNKWV 49
IAPPE + + W+
Sbjct: 105 IAPPEKKYSVWI 116
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 19.0 bits (37), Expect = 6.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2
Query: 88 GFISI*VFLPKSTYPFIVFVLWWCNG 11
G+I I L PF++ +W +G
Sbjct: 157 GYIIIGFLLAGIVQPFLIHWIWTPHG 182
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 19.0 bits (37), Expect = 6.4
Identities = 5/6 (83%), Positives = 6/6 (100%)
Frame = -2
Query: 37 VFVLWW 20
+FVLWW
Sbjct: 228 LFVLWW 233
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 19.0 bits (37), Expect = 6.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 163 R*PFQVHLLIIANCFQVF 110
R P + L + CFQVF
Sbjct: 176 RQPTSIDLNAVRLCFQVF 193
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 19.0 bits (37), Expect = 6.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 163 R*PFQVHLLIIANCFQVF 110
R P + L + CFQVF
Sbjct: 176 RQPTSIDLNAVRLCFQVF 193
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 19.0 bits (37), Expect = 6.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 109 ETLESNSQLLTSEPEMVID 165
+ LE+ S L EP +ID
Sbjct: 38 QPLEARSADLVPEPRYIID 56
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 18.6 bits (36), Expect = 8.5
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -1
Query: 167 ESITISGSLVNNC 129
E +++SG +N+C
Sbjct: 305 EHLSVSGGALNDC 317
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 18.6 bits (36), Expect = 8.5
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -2
Query: 25 WWCNGSS 5
WW NGS+
Sbjct: 405 WWDNGSN 411
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,825
Number of Sequences: 438
Number of extensions: 1063
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 3039192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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