Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D06
         (526 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    27   0.51 
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    27   0.51 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   0.89 

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 26.6 bits (56), Expect = 0.51
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 3   TRPNSNFYKRNYHFVTKNPNMPELTELDKATAS 101
           T P SNFY+  +  +  +P++P L  +  A A+
Sbjct: 56  TEPPSNFYQATHGLLQTHPSVPSLKPVAGAPAA 88


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 26.6 bits (56), Expect = 0.51
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 3   TRPNSNFYKRNYHFVTKNPNMPELTELDKATAS 101
           T P SNFY+  +  +  +P++P L  +  A A+
Sbjct: 56  TEPPSNFYQATHGLLQTHPSVPSLKPVAGAPAA 88


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 0.89
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 526  TVVPVATVSLPAAAVSGALNLSAAAIVACCD 434
            T+ PVA  +  AAA +GA N+   + +A  D
Sbjct: 1125 TLAPVAMAAAAAAAAAGASNVDVPSTIAETD 1155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,134
Number of Sequences: 2352
Number of extensions: 10232
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)