Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_D05
(502 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 125 8e-29
BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 125 8e-29
BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 125 8e-29
BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 125 8e-29
U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 124 2e-28
AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 v... 79 1e-14
AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 p... 48 2e-05
Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase prot... 30 5.2
X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligas... 30 5.2
S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase prot... 30 5.2
BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein pr... 30 5.2
BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein. 30 5.2
BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein. 30 5.2
BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein. 30 5.2
BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligas... 30 5.2
BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligas... 30 5.2
BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligas... 30 5.2
BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligas... 30 5.2
AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing ... 30 5.2
AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase pr... 30 5.2
AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase pr... 30 5.2
AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein pr... 30 5.2
AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligas... 30 5.2
>CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein.
Length = 137
Score = 125 bits (302), Expect = 8e-29
Identities = 58/126 (46%), Positives = 82/126 (65%)
Frame = +3
Query: 66 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 245
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 246 GFTIVYKKAKATNKPVKNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAIL 425
G +V K+ KP + +R AR +L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 426 RSQRPI 443
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 125 bits (302), Expect = 8e-29
Identities = 58/126 (46%), Positives = 82/126 (65%)
Frame = +3
Query: 66 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 245
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 246 GFTIVYKKAKATNKPVKNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAIL 425
G +V K+ KP + +R AR +L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 426 RSQRPI 443
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 125 bits (302), Expect = 8e-29
Identities = 58/126 (46%), Positives = 82/126 (65%)
Frame = +3
Query: 66 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 245
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 246 GFTIVYKKAKATNKPVKNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAIL 425
G +V K+ KP + +R AR +L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 426 RSQRPI 443
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 125 bits (302), Expect = 8e-29
Identities = 58/126 (46%), Positives = 82/126 (65%)
Frame = +3
Query: 66 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 245
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 246 GFTIVYKKAKATNKPVKNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAIL 425
G +V K+ KP + +R AR +L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 426 RSQRPI 443
RSQ+P+
Sbjct: 119 RSQKPV 124
>U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 124 bits (299), Expect = 2e-28
Identities = 57/126 (45%), Positives = 82/126 (65%)
Frame = +3
Query: 66 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 245
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 246 GFTIVYKKAKATNKPVKNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAIL 425
G +V K+ KP + +R AR +L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 426 RSQRPI 443
R+Q+P+
Sbjct: 119 RTQKPV 124
>AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28
variant protein.
Length = 95
Score = 78.6 bits (185), Expect = 1e-14
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +3
Query: 66 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 245
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 9 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 66
Query: 246 GFTIVYKK 269
G +V K+
Sbjct: 67 GVVVVIKR 74
>AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28
protein.
Length = 53
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 303 IRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAILRSQRPI 443
+R AR +L + +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 4 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 50
>Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligase
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein.
Length = 258
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 44 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 75
>BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing
protein 43 protein.
Length = 233
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein
protein.
Length = 112
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 99 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 194
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,679,813
Number of Sequences: 237096
Number of extensions: 1166441
Number of successful extensions: 2034
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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