Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_D05
(502 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 23 2.4
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 22 3.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 3.1
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 4.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.1
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 4.1
AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 22 4.1
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 4.1
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 21 7.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 7.2
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 9.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 9.5
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 9.5
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 9.5
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 96 RNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKK 212
R N+ L+KK N PF K P +T + N + K+
Sbjct: 8 RINSCDLLKKRNENDPFLKRP--ITGDEKWVVNNIKRKR 44
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 306 RRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAILRSQ 434
+RP A + L + KR N Y T+ + L R + +Q
Sbjct: 21 KRPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQ 63
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 3.1
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2
Query: 372 DLPLAISWL 346
DLPL+ISWL
Sbjct: 638 DLPLSISWL 646
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 4.1
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 293 KEHYPSSIQSWSEEV 337
K +YPS I W +++
Sbjct: 62 KNNYPSDIDQWHDKI 76
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 42 SFSN*NYKMSSHLNWMIIRNNN 107
S SN NYK S++ N+ NNN
Sbjct: 317 SLSN-NYKYSNYNNYNNYNNNN 337
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 60 SFNSKNYNNTIHNVFATSSC 1
++N+ NYNN +N ++C
Sbjct: 332 NYNNNNYNNNNYNNNYNNNC 351
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 4.1
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 293 KEHYPSSIQSWSEEV 337
K +YPS I W +++
Sbjct: 62 KNNYPSDIDQWHDKI 76
>AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein.
Length = 50
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 446 LDRPLRPKNS*GATQSSFSQVCTVMI 369
LD ++PK+ G+ S +CTV++
Sbjct: 25 LDCSIKPKDHNGSIYWSMYHLCTVVL 50
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 4.1
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 293 KEHYPSSIQSWSEEV 337
K +YPS I W +++
Sbjct: 62 KNNYPSDIDQWHDKI 76
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 21.0 bits (42), Expect = 7.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 306 RRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAILRSQ 434
+RP A + L + KR N Y T+ + L R + +Q
Sbjct: 21 KRPRTAFSGEQLARLKREFAENRYLTERRRQQLSRDLGLNEAQ 63
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 7.2
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2
Query: 60 SFNSKNYNNTIHN 22
++N+ NYNN +N
Sbjct: 328 NYNNNNYNNNYNN 340
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2
Query: 60 SFNSKNYNNTIHN 22
++N+ NYNN +N
Sbjct: 97 NYNNNNYNNNNYN 109
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2
Query: 60 SFNSKNYNNTIHN 22
++N+ NYNN +N
Sbjct: 97 NYNNNNYNNNNYN 109
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 20.6 bits (41), Expect = 9.5
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 246 PFCQDSQRHRRLSYGSSHCIYTS*G*SHCWVLC 148
PFC+ + + L C TS G C ++C
Sbjct: 85 PFCEKNPKLGILGTHGRQCNDTSIGVDGCDLMC 117
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 20.6 bits (41), Expect = 9.5
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 246 PFCQDSQRHRRLSYGSSHCIYTS*G*SHCWVLC 148
PFC+ + + L C TS G C ++C
Sbjct: 86 PFCEKNPKLGILGTHGRQCNDTSIGVDGCDLMC 118
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,275
Number of Sequences: 438
Number of extensions: 2280
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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