Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D04
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    31   0.009
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.35 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   0.80 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   5.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.5  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 30.7 bits (66), Expect = 0.009
 Identities = 20/77 (25%), Positives = 36/77 (46%)
 Frame = +2

Query: 35  VEFVAEKTVTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANE 214
           VE   EK +++DE ++    + G         D + P K ++  +D  ++TK + +   +
Sbjct: 215 VEKEREKELSDDEAEEEKKEEEGED------KDKDKP-KIEDVGEDEDEDTKKEDKKKKK 267

Query: 215 TTTEKQNATDSETKTKP 265
           T  EK    +   KTKP
Sbjct: 268 TIKEKYTEDEELNKTKP 284


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 14/68 (20%), Positives = 34/68 (50%)
 Frame = +2

Query: 47  AEKTVTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTE 226
           A+ +  ++E++ S  S+     S   G  +    +A +KP++  +E ++  +    +   
Sbjct: 38  ADDSDNDEEERPSFKSRKPKNYSAPIGFVAGGVQQAGKKPENVKKEDESDEEKPTTSFKL 97

Query: 227 KQNATDSE 250
           K +++DSE
Sbjct: 98  KDSSSDSE 105


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 0.80
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 560 SHIHHHTTTLM 528
           SH+HHH T+L+
Sbjct: 132 SHVHHHQTSLL 142


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/54 (22%), Positives = 28/54 (51%)
 Frame = +3

Query: 135 QRHRIKPMRNLMIRLRKQKIKPKTRTKQQLRNRTQQILRPKLNRKLLFSKNRSN 296
           Q+  +  ++ ++  + K+ I     T++ +   +  +LRPK + K+ F   R+N
Sbjct: 438 QKFAMLEIKTVLCGILKKFILEAVDTRKDMAFVSDLVLRPKGSIKVKFVPRRAN 491


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 188 KNKTQNANETTTEKQNATDSETKTKPK 268
           +N  +  N    E+  ATD + + +PK
Sbjct: 304 QNPGEKTNIAPRERPRATDHQRRNEPK 330


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 188 KNKTQNANETTTEKQNATDSETKTKPKVV 274
           KN+     +   ++QN + S T T P  V
Sbjct: 176 KNRRAKCRQQLQQQQNKSASRTTTSPTKV 204


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 216 QQLRNRTQQILRPKLN 263
           +++RNR +++ R KLN
Sbjct: 30  REMRNRAEKMRRDKLN 45


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 505 FLDFFFSRAFCVFLHVY 455
           F+  F S  FC+F ++Y
Sbjct: 250 FVGIFCSLYFCIFGYIY 266


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 250  LRICCVLFLSCCFVRVLGF 194
            +RIC  + L+C ++ + GF
Sbjct: 1121 IRICWNVLLNCVYLFLCGF 1139


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 505 FLDFFFSRAFCVFLHVY 455
           F+  F S  FC+F ++Y
Sbjct: 75  FVGIFCSLYFCIFGYIY 91


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 19  TQLGKCRVCR*KNC 60
           T   +CR CR K C
Sbjct: 87  THRNQCRACRLKKC 100


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 19  TQLGKCRVCR*KNC 60
           T   +CR CR K C
Sbjct: 87  THRNQCRACRLKKC 100


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = +2

Query: 158 EKPDDTTQETKNKTQNANETTTEKQNATDSETKTKPKVVVLKEPIKSD 301
           +K +  T E KNKT + ++      +  + + + K     +   IKS+
Sbjct: 143 KKENKMTWEPKNKTDDDDDALVSDSDDREKDEEDKRDDTDMHGRIKSE 190


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 529 CFTAELFYFLDFFFSRAFC 473
           CF + ++ F   FF  A C
Sbjct: 63  CFNSYMYAFTHIFFFFAIC 81


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 232 LFLSCCFVRVLGFIFCFLSRIIRFLI 155
           +++S   + V    FCF  R+IR  I
Sbjct: 176 VYVSYLLIFVQQIPFCFFVRVIRLKI 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,202
Number of Sequences: 336
Number of extensions: 2044
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)