Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_D04
(573 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 40 2e-04
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 38 0.001
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 36 0.003
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 35 0.010
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 33 0.022
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 33 0.039
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 31 0.091
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 30 0.28
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 30 0.28
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 30 0.28
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 29 0.48
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.48
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.64
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 29 0.64
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 28 0.84
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 28 0.84
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 28 0.84
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 28 0.84
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 1.5
SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|... 27 2.0
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 27 2.6
SPCC757.04 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.6
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 27 2.6
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 27 2.6
SPBC1347.06c |cki1||serine/threonine protein kinase Cki1|Schizos... 26 3.4
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 26 3.4
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 26 3.4
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 26 3.4
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 26 3.4
SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 26 3.4
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 26 4.5
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 4.5
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 4.5
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 25 6.0
SPAC31A2.10 |||RanGTP-binding protein |Schizosaccharomyces pombe... 25 6.0
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 6.0
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 25 6.0
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 25 7.9
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 25 7.9
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 25 7.9
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 25 7.9
SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces pomb... 25 7.9
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 25 7.9
SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated |Schizosac... 25 7.9
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 7.9
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 7.9
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 25 7.9
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 40.3 bits (90), Expect = 2e-04
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Frame = +2
Query: 179 QETKNKTQNANETTTEKQNATDSETKTKPKVVVLKEPIKSDEVVLSLQP--LSSEQFKVS 352
QE + + + E EK+ TD K + +K+ +K ++ +S+Q L +E +
Sbjct: 506 QEVEEPVETSPEEEAEKK--TDEPVKMRK----VKKLVKVADLSVSVQEDRLPTEVLEKY 559
Query: 353 KTKINELNAIDKKRTDRESALNNLEAFVVDTQMKIDMXXXXXXXXXXXXXXXKKLCSETS 532
+ +++ A DK + N LE ++ DT+ K+D K++ ++
Sbjct: 560 REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLD-DIYAPFTNEEESSKFKEMLTKAE 618
Query: 533 EWLYDDGYDS 562
+WLY++G D+
Sbjct: 619 DWLYEEGEDT 628
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 37.5 bits (83), Expect = 0.001
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Frame = +2
Query: 44 VAEKTVTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQET-KNKTQNANETT 220
+ EK T + D D L ++ +T S+L S + PD++ E+ + ++ E
Sbjct: 157 LTEKLNTINLDIDKILDELDTTRSQLH-SIIKLPDRSSSFTLQCINESVRPQSTKVKEEA 215
Query: 221 TEKQNATDSETK--TKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSKTKINELNAIDKKR 394
T D E K T + L++ + + L S+ K+ + +NE+ DK
Sbjct: 216 TTSSKGKDEEKKVSTVEQRTQLQQLSRLQDQQNGLMESRSQSLKILDSNVNEM---DKLI 272
Query: 395 TDRESALNNLE 427
+RE+ALNN+E
Sbjct: 273 MERENALNNVE 283
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 36.3 bits (80), Expect = 0.003
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 RGSGLLNLVN-VEFVAEKTVTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQ 181
R G N +N +FV ++T+ E +++ S G ++ T + DE+ DDT+Q
Sbjct: 651 RDFGDTNAINRPKFVGQQTLEEFYASETSESSEGEY-------ETSTSESEDEETDDTSQ 703
Query: 182 ETKNKTQNANETTTEKQNATDSETKT 259
E N+ + + TE N + TK+
Sbjct: 704 EEDNEKNSTPDEDTENNNTSSISTKS 729
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 34.7 bits (76), Expect = 0.010
Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Frame = +2
Query: 62 TEDEDKDSTL-SKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTEKQNA 238
T+ DS + +++ STI S D+ DE+ + +E++ ++ T
Sbjct: 634 TQPSQVDSLVPTQLDSTIPTQIDSVQRNKDQDDEEILEERRESRRDSKTFLSRTMLYNKD 693
Query: 239 TDSETKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSKTKINELNAIDKKRTDRESALN 418
T ++ ++ I+SD+ + LS + S ++ N ID + T ++ +
Sbjct: 694 TGKADSAWASDLIEEQAIESDDEYAGIGGLSDDGLSDSDAELEVQNMIDDETTIQKGEVA 753
Query: 419 NLEAFVVDTQMKID 460
++ F D +M D
Sbjct: 754 SMAQFAKDQEMDRD 767
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 33.5 bits (73), Expect = 0.022
Identities = 19/81 (23%), Positives = 32/81 (39%)
Frame = +2
Query: 326 LSSEQFKVSKTKINELNAIDKKRTDRESALNNLEAFVVDTQMKIDMXXXXXXXXXXXXXX 505
+S +++ K+ IDK + ++ALN LE + Q +D
Sbjct: 570 MSDNALRLASAKLERRLQIDKSKAAHDNALNELETLLYRAQAMVDDDEFLEFANPEETKI 629
Query: 506 XKKLCSETSEWLYDDGYDSDT 568
K E+ +WL + G S T
Sbjct: 630 LKNDSVESYDWLIEYGSQSPT 650
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 32.7 bits (71), Expect = 0.039
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Frame = +2
Query: 8 GSGLLNLVNVEFVAEKTVTEDEDKDSTL---SKIG-STISKLFGSDSETPDKADEKPDDT 175
G G ++ + ++EKT ++ D ++ L S +G SK + + +EK
Sbjct: 387 GKGASDVSDTAEISEKTEAKNADSEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKI 446
Query: 176 TQETKNKTQ---NANET----TTEKQNATDS-ETKTKPKVVVLKEPIKSDEVVLSLQPLS 331
T E KT+ A ET +K TDS ET+ K + KE + S++
Sbjct: 447 TNEDTGKTETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDD 506
Query: 332 SEQFKVSKTKINELNAIDKKRTDRESAL-NNLEA 430
E+ SK +++ D K T+ + A +N EA
Sbjct: 507 KEEKTDSKETADKVEQTDSKDTNEKPAKDDNKEA 540
Score = 32.3 bits (70), Expect = 0.052
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Frame = +2
Query: 32 NVEFVAEKTVTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKP-DDTTQETKNKTQNA 208
+VE K ED K T K T S + +D + +K D K +D +ET++K +
Sbjct: 438 DVEEKDTKITNEDTGKTETDVKAKETDS-IEANDKD--EKTDSKETEDKVEETESKEADV 494
Query: 209 NETTTEKQNATDSETKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSKTKINELNAIDK 388
T+ D E KT K K ++D + +P + K + K ++++ D
Sbjct: 495 KAKETDSIEVDDKEEKTDSKETADKVE-QTDSKDTNEKPAKDDN-KEANEKAEKVDSKDV 552
Query: 389 KRTDRESA 412
K E+A
Sbjct: 553 KEKIEEAA 560
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 31.5 bits (68), Expect = 0.091
Identities = 22/98 (22%), Positives = 43/98 (43%)
Frame = +2
Query: 131 DSETPDKADEKPDDTTQETKNKTQNANETTTEKQNATDSETKTKPKVVVLKEPIKSDEVV 310
DSE + A ++ +E + + + A++ + +D E + KE K +
Sbjct: 379 DSEDEEFARQQLLSRKEEEEEEDEEASDFEDSFADFSDGEADDLDESRWRKEAAKEHNSL 438
Query: 311 LSLQPLSSEQFKVSKTKINELNAIDKKRTDRESALNNL 424
L++ + + V KI +D+K ++ALNNL
Sbjct: 439 LAVGYKNDRSYVVRNNKIGVFKHVDEKGLKFQTALNNL 476
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 29.9 bits (64), Expect = 0.28
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 195 KPKTRTKQQLRNRTQQILRPKLNRKLLFSKNRSN--RMKLSLVYNRYRPNNSKFQ 353
KP KQ++ N+T+ L+ L++++ S+ +S + + VY RY P+N Q
Sbjct: 140 KPSDEQKQEVANKTKLALQKILSKQIAQSQPKSAVVQQRDDPVYIRYTPSNQMGQ 194
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 29.9 bits (64), Expect = 0.28
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +2
Query: 44 VAEKTVTEDED-KD---STLSKIGSTISKLFGSDSETPDKADEKPDD 172
+ EK + ED D KD + +++LF D++TP+K++ PDD
Sbjct: 269 IYEKKLEEDADAKDIAPRAIVNFWRLLTELFRGDNDTPEKSNALPDD 315
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 29.9 bits (64), Expect = 0.28
Identities = 23/94 (24%), Positives = 44/94 (46%)
Frame = +2
Query: 146 DKADEKPDDTTQETKNKTQNANETTTEKQNATDSETKTKPKVVVLKEPIKSDEVVLSLQP 325
+++DE+ D Q K Q++ E TTE +A + +T + E S + + QP
Sbjct: 239 ERSDEEESDNEQVNDEKKQSSEEDTTENNSAAEVIDETVNDL----ESAVSKGLQIETQP 294
Query: 326 LSSEQFKVSKTKINELNAIDKKRTDRESALNNLE 427
S + + K E N + ++ E++ ++LE
Sbjct: 295 ASHDGEVDGEVKEEEENKVSSS-SNIEASQSSLE 327
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 29.1 bits (62), Expect = 0.48
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 131 DSETPDKADEKPDDTTQETKNKTQ---NANETTTEKQNATDSETKTKPKVVVLKEPIKS 298
D + PD + + + QE KN+++ N +N D+ + P++ + KE K+
Sbjct: 236 DKDIPDDGESRDNKRFQEKKNRSERQKNKARDNARLRNLVDTALASDPRIKLFKEQEKA 294
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 0.48
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Frame = +2
Query: 41 FVAEKTVTEDEDKDSTL-SKIGSTISKLFGSDSETPDKADEKPDDTTQETKN-------K 196
F EK ED+D + + ++I + + E P+ +D+K DT + KN K
Sbjct: 1242 FEKEKRRIMSEDRDKLIRGRQKTSIVAKYRNKRELPEDSDDK-QDTASKDKNSLETIDEK 1300
Query: 197 TQNANETTTEKQNATDSETKTKPKVVVLKEPIKSDE 304
++A++ + + D+E + K+ L++P ++E
Sbjct: 1301 MEDASKIEGDAKTGDDNEMEDLDKMEDLEKPDYAEE 1336
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.7 bits (61), Expect = 0.64
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +2
Query: 122 FGSDSETPDKADEKPDDTTQETKNKTQNANETTTEKQNATDSETKTKPKVVVLKEPIKSD 301
F S+ + D ++ ETK + +TT Q +E + + K+P SD
Sbjct: 598 FSSEHKPQPSLKTTTDVSSPETKQNIADIRKTTLTDQTEEFTERRDNNGSIPSKQP--SD 655
Query: 302 EVVLSLQPLSSEQFKVS 352
E L + L S+Q VS
Sbjct: 656 EQHLGKESLPSQQSTVS 672
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 28.7 bits (61), Expect = 0.64
Identities = 17/97 (17%), Positives = 39/97 (40%)
Frame = +2
Query: 65 EDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTEKQNATD 244
E+ED + T S +DS + +EK Q TK+K + +N
Sbjct: 13 EEEDTEFVPGDSTDTESSFSDADSSEEEFVEEKEASQVQSTKSKIATSESEDVTLKNIAK 72
Query: 245 SETKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSK 355
+ + ++ ++ +S+ + +Q + + K ++
Sbjct: 73 KNKRERNDKLIPQQSNESEAIEKPVQSTTEVELKTNE 109
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 28.3 bits (60), Expect = 0.84
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 50 EKTVTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTE 226
+K + + K T+S + + G+D + ++ DDT Q+T +N N T+E
Sbjct: 97 DKHINSEGSKSETISD-----TAISGNDDTMEKRLEQFSDDTLQDTLETEKNLNSKTSE 150
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.3 bits (60), Expect = 0.84
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 7/175 (4%)
Frame = +2
Query: 50 EKTVTEDEDKDSTL-SKIGSTISKLFGSDSETPDKADEKPDDTTQ---ETK---NKTQNA 208
EK T + K+S + SKI ST S + ++ADE+ D E K N + +
Sbjct: 425 EKLQTYLDKKESNVTSKIKSTAEN--SSKPLSMNEADERKDGLNNLLFENKSGANTKEMS 482
Query: 209 NETTTEKQNATDSETKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSKTKINELNAIDK 388
N T T K+N + + T P ++ +K E+ ++ S + K+ ++ N+ + K
Sbjct: 483 NGTETAKENCSPQQDSTSP-TSGYQDLVK--ELAKEIEMRKSLELKLKLSQSNKAGPV-K 538
Query: 389 KRTDRESALNNLEAFVVDTQMKIDMXXXXXXXXXXXXXXXKKLCSETSEWLYDDG 553
R R + + VV D L SE S+ L DDG
Sbjct: 539 HRKRRPKSKRRITGKVV-----FDSPNVASGVESDEGSEEISLDSEYSDILSDDG 588
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 28.3 bits (60), Expect = 0.84
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 71 EDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTEKQNAT 241
E ++ ++I +T + E ++EKP E TQN + +T+ N T
Sbjct: 372 EVPENETNQIPTTEEHFPATTEEVAPASEEKPATGPAEESTSTQNVEQASTQNDNGT 428
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 28.3 bits (60), Expect = 0.84
Identities = 18/82 (21%), Positives = 37/82 (45%)
Frame = +2
Query: 62 TEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTEKQNAT 241
T+D+ + + + + S +SK + ++ P +TT K Q +NE E+
Sbjct: 725 TDDKGEQVSNADVDSGLSKTERLTIQQTNEIKHVPTNTTSSVKLPQQPSNEDEKERITTA 784
Query: 242 DSETKTKPKVVVLKEPIKSDEV 307
D T + + +EP +++ V
Sbjct: 785 DYADSTSLERLESQEPNRNELV 806
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/72 (19%), Positives = 34/72 (47%)
Frame = +2
Query: 47 AEKTVTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTE 226
+E+ +E+E S+ S+ S+ S+ E P K + ++ ++ ET +E
Sbjct: 38 SEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESE 97
Query: 227 KQNATDSETKTK 262
+ + E++++
Sbjct: 98 EDSEVSDESESE 109
>SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|chr
3|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 23 NLVNVEFVAEKTVTEDEDKDSTLS---KIGSTISKLFGSDSETPDKADEK 163
NLV+V+ AE+T+ ++DK++ L ++ + L+ D E +A K
Sbjct: 52 NLVDVQEPAEETIPLEQDKENDLELELQLPDLLKALYSDDIEAQIQATAK 101
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 2.6
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = +2
Query: 62 TEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETT-TEKQNA 238
+ D + +S+ ST S SDS + + DTT + Q++ +T +E+ +
Sbjct: 287 SSDSESESSSEDSDSTSSSS-DSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTS 345
Query: 239 TDSETKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSKTKINE 370
E +K LK + DE S + SS K T++ +
Sbjct: 346 VKDEDSSKIHDKSLKRKHEDDESSTSTK--SSRTTKTPFTRVGD 387
>SPCC757.04 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 684
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 100 YFR-QGAVFIFVFRDSFFSDKLY 35
+FR Q + F+FV+R+SF SD Y
Sbjct: 208 FFRYQYSQFLFVYRESFLSDYYY 230
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 26.6 bits (56), Expect = 2.6
Identities = 24/123 (19%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Frame = +2
Query: 26 LVNVEFVAEKTVTEDEDKDSTLSKIGST-ISKLFG-SDSETPDK--------ADEKPDDT 175
++N+ + +V E D+ L ++G+T ++K+ SD+E + ++ D
Sbjct: 8 VINMPALPMNSVNEQHDRHEDLPEVGTTSVTKIINDSDNEDDENGMDLGRVASESLEGDA 67
Query: 176 TQETKNKTQNANETTTEKQNATDSE-TKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVS 352
T++++ + +++N E + K + LK+ KS+E + + P ++ + +
Sbjct: 68 VVSIDINTEDSSLSPAKQENEKSPEGIEQKYQEEDLKDDKKSNETIATPVPDAASRASLE 127
Query: 353 KTK 361
K K
Sbjct: 128 KQK 130
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 26.6 bits (56), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 185 TKNKTQNANETTTEKQNATDSETKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSKTKI 364
TK + N T+E+ A D+ K L + I S + LSL P S+ + ++K+
Sbjct: 1017 TKYRNHFGNLMTSEETKAPDNNDLHKR----LSDVINSQQKFLSLSPQVSKDYYDVRSKL 1072
Query: 365 NE 370
N+
Sbjct: 1073 ND 1074
>SPBC1347.06c |cki1||serine/threonine protein kinase
Cki1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 26.2 bits (55), Expect = 3.4
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 62 TEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKT-QNANETTTEKQNA 238
TEDE+ D L G L ++ET ++ KP E+K+ QN T
Sbjct: 288 TEDENFDWNLLNNGKGWQSLKSRNAETENQRSSKPPAPKLESKSPALQNHASTQNVVSKR 347
Query: 239 TDSE 250
+D E
Sbjct: 348 SDYE 351
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 3.4
Identities = 20/111 (18%), Positives = 46/111 (41%)
Frame = +2
Query: 125 GSDSETPDKADEKPDDTTQETKNKTQNANETTTEKQNATDSETKTKPKVVVLKEPIKSDE 304
GS E + KP +++ K QN + +T +K+N E + + V P E
Sbjct: 286 GSPVEETAILNRKPTLRKKKSIPKKQNESSSTIQKENTVQQEASSSEEEAVKSLP----E 341
Query: 305 VVLSLQPLSSEQFKVSKTKINELNAIDKKRTDRESALNNLEAFVVDTQMKI 457
+ + +++ ++ + ++ +++ + N LE V D + +
Sbjct: 342 TQRTTSRIETQEEEIKEEEMEGEEEEEEEEVPNYESENELEDKVGDLSLSL 392
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 3.4
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = +2
Query: 188 KNKTQNANETTTEKQNATDSETKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSKTKIN 367
K+ + A E +K+ + K + L+E + S +L + SSE +++ +IN
Sbjct: 5 KSAAKKAREALVQKKVINSNVPTDKKSIDQLQENVTSKSHLL--EESSSEDEEINSFQIN 62
Query: 368 ELNAIDKKRTDRESALNNLEA 430
E A + + L LEA
Sbjct: 63 EEYAKRFEHNKKREELQKLEA 83
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 26.2 bits (55), Expect = 3.4
Identities = 26/92 (28%), Positives = 40/92 (43%)
Frame = +2
Query: 152 ADEKPDDTTQETKNKTQNANETTTEKQNATDSETKTKPKVVVLKEPIKSDEVVLSLQPLS 331
++EK T+ ++ T+ T ++N S K+KP V +PI SDE +
Sbjct: 265 SEEKDSQPTRAPQSPTKPVLLTAPRRKNK--SPKKSKPAVFKPVKPIFSDEDEDDDDLTA 322
Query: 332 SEQFKVSKTKINELNAIDKKRTDRESALNNLE 427
S+ F SK N+ + KK E L E
Sbjct: 323 SQPF--SKGICNDSMQVAKKNFTEEIPLKEDE 352
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 26.2 bits (55), Expect = 3.4
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Frame = +2
Query: 71 EDKDST-LSKIGSTISKLFGS-DSETPDKADEKPDDTTQETKNKTQNANETTTEKQ---N 235
ED+ +T S+ G+ S L S++ + + P DT + T+N + A E+TT +Q N
Sbjct: 330 EDRITTNQSRSGNDESSLVDFLTSKSDNSSFNFPSDTYEGTENILETAYESTTARQVNNN 389
Query: 236 ATDSETKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFK------VSKTKINELNAIDKKRT 397
T K + L + + +V Q +E F+ + N L+ + K T
Sbjct: 390 KPGKSTVKKREEETLNNMVSA--LVEEQQSTGNELFRKGDFSQAIEEFTNSLSQLPAKHT 447
Query: 398 DRESALNN 421
R L+N
Sbjct: 448 KRVPLLSN 455
>SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 540
Score = 26.2 bits (55), Expect = 3.4
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 158 EKPDDTTQETKNKTQNANETTTEKQNATDSETKTKPKVVVLKEPIKSDEVVLSLQPLSSE 337
EK +D+ +ETKN+ + T K + +T P VLK+ ++ + S+ P +
Sbjct: 102 EKTNDSIKETKNENFRMDVLETYKCKQLNHQTTHLPTNTVLKKRSLFNDAI-SIVPNKKK 160
Query: 338 Q 340
Q
Sbjct: 161 Q 161
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 25.8 bits (54), Expect = 4.5
Identities = 25/136 (18%), Positives = 48/136 (35%), Gaps = 1/136 (0%)
Frame = +2
Query: 53 KTVTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKP-DDTTQETKNKTQNANETTTEK 229
KT ED ++D SKI S + P+ +DE + T K Q + K
Sbjct: 435 KTQIEDLEEDQNKSKIASKDGTNLKEINSVPEFSDENVINQTGPAKKTPVQRRKDGKFAK 494
Query: 230 QNATDSETKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSKTKINELNAIDKKRTDRES 409
+ KP + +K+ + ++ S + + K L
Sbjct: 495 STKRKKQKSLKPDTENQESSVKNKKAKSNVNLQYSPKTPICKINDETLKPPTIANIAGHK 554
Query: 410 ALNNLEAFVVDTQMKI 457
+N+L + ++T + +
Sbjct: 555 QMNHLTSENIETPVPV 570
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.8 bits (54), Expect = 4.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 59 VTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANE 214
V E+E K S ++ S P +EK DDT+ + T+N N+
Sbjct: 962 VGEEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDV--TTENTND 1011
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 4.5
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +2
Query: 104 STISKLFGSDSETPDKADEKPDDTTQETKNKTQNAN---ETTTEKQNATDSETKTKPK-- 268
+T +FG D+ K + ++ ++ K +Q + E +++QN S+TKT
Sbjct: 3095 NTFCLIFGRDANKLSKEKSRIENGFKKIKETSQGIDKFKEALSDQQNVLFSKTKTANDRL 3154
Query: 269 --VVVLKEPIKSDEVVLSLQPLSSEQFK 346
++ K+ +++ + V SLQ +S Q K
Sbjct: 3155 QCIIQTKQAVEAKK-VYSLQAEASLQKK 3181
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 6.0
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 VSKTKINELNAI-DKKRTDRESALNNLEAFVVDTQMKI 457
+++TK ++N + D +T R+ L NLEAF MKI
Sbjct: 363 LAETKQIDMNRMKDYLKTRRDQYLTNLEAFPSSLFMKI 400
>SPAC31A2.10 |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 460
Score = 25.4 bits (53), Expect = 6.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 308 VLSLQPLSSEQFKVSKTKINELNAIDKKRTDRESALNN 421
+L++ S + T I +++A+DK D LNN
Sbjct: 290 LLNISQAKSPVLALQLTSIKDVSALDKAHQDNSEDLNN 327
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.4 bits (53), Expect = 6.0
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 203 NANETTTEKQNATDSETKTKPKV-VVLKEP-IKSDEVVLSLQPLSSEQFK 346
N NET E+ + DSET T V VL P + SD+ L P + E+F+
Sbjct: 274 NVNETYDEEDSDLDSETSTVNWVQSVLNLPSLLSDD--LMANPKNKERFE 321
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 25.4 bits (53), Expect = 6.0
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +2
Query: 62 TEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTEKQNAT 241
+E + +S+L++ S S +PD D N+ N N+TT E + ++
Sbjct: 45 SEPLENNSSLTRSTDDPSVEIRSKLVSPDNEANLLSDQNITISNENNNENDTTEEAETSS 104
Query: 242 DSE 250
+E
Sbjct: 105 GNE 107
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 7.9
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +3
Query: 141 HRIKPMRNLMIRLRKQKIKPKTRTKQQLRNRTQQILRPKLNRKLLFSKNRSNRMKLSLVY 320
H+ K R +R RK K K +++ + T+Q++R + R K++
Sbjct: 526 HQQKQARRRRVR-RKHAEKRKQMAEKRRNSGTEQVVRQLSKSNVEVIGKGGERKKVASNS 584
Query: 321 NRYRP 335
N+Y P
Sbjct: 585 NKYHP 589
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 68 DEDKDSTLSKIGSTISKLFGSDSETPDKAD--EKPDDTTQETKNKTQNANETTTEKQNAT 241
D+ KDS+L++ FG + D+ + E + +E+ ++ N+ E+ +++
Sbjct: 58 DKKKDSSLNESEDEDFAGFGESASENDELESAESEAENDEESSSQKSNSKESHAQRKKLQ 117
Query: 242 DSETKTKP 265
KP
Sbjct: 118 KERKAMKP 125
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 7.9
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Frame = +3
Query: 210 TKQQLRNRTQQILRPKLNRKLLF------SKNRSNRMKLSLVYNRYRPNNS 344
T ++++NRTQ+ + K ++++ SKN + R + L N RP N+
Sbjct: 106 TAERVKNRTQEAQKEKEEKRIVTLQNDGGSKNTTARKQKQLKKNGLRPLNT 156
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.0 bits (52), Expect = 7.9
Identities = 28/102 (27%), Positives = 41/102 (40%)
Frame = +2
Query: 80 DSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTEKQNATDSETKT 259
DS + K+ K G K E P + T+ET Q ++ T+ + + +K
Sbjct: 663 DSAVLKVNKPEMKE-GQKKAEARKKKESPLEATEETNPWLQVPDQRTSSAKKLDKNSSKA 721
Query: 260 KPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSKTKINELNAID 385
K +K D+V SLQ L E KV I E A +
Sbjct: 722 DKK----NHKLKMDKVA-SLQELVEEP-KVQPDLIFEEKAFE 757
>SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 840
Score = 25.0 bits (52), Expect = 7.9
Identities = 17/75 (22%), Positives = 31/75 (41%)
Frame = +2
Query: 23 NLVNVEFVAEKTVTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQ 202
NL++ A + E +++T + + S + + + A + TT T+N
Sbjct: 750 NLISA-IEAYDSQNESSQENATYTVVESNGNANGDNTATNSQGATDNGQTTTNTTQNNVD 808
Query: 203 NANETTTEKQNATDS 247
N TT Q TD+
Sbjct: 809 NTQATTDNTQANTDN 823
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = +2
Query: 95 KIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTEKQNATDSETKTKP 265
++G+T+ K ++ETP + K + +++K + + +N T + +E T P
Sbjct: 225 RVGATVPKKRLVETETPPPSSSKLKEDYKDSKREMKRSN-TPWSNASIKKNEVPTVP 280
>SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 7.9
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Frame = +3
Query: 183 KQKIKPKTRTKQQLRNRTQQ---------ILRPKLNRKLLFSKNRSNRMKL 308
K+K+KP T+T Q N+T Q +L +LN N+S+++K+
Sbjct: 191 KEKLKPFTKTMQIHANKTVQLSQTIQKATLLLQRLNNTKNIGLNKSSKLKI 241
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = -2
Query: 275 QQLSV*FWSQNLLRSVSQLLFRSRFGFYFLFPESYHQVSH 156
++L V F + + +R + +LL SR+G+Y P+SY S+
Sbjct: 74 RRLRVDFPTADQIRRLDKLLGPSRYGYY---PQSYANQSY 110
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.0 bits (52), Expect = 7.9
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Frame = +2
Query: 47 AEKTVTEDEDKDSTLSKIGSTISKLFGSDSETPDKADEKPDDTTQ-ETKNKTQNANETTT 223
AEK + +S I S + +L +ET DE T + E + T E+ +
Sbjct: 218 AEKIELRVHESLKRISCIRSKVEELDQEITETARLQDELFKSTEEYEQQMITIRHLESQS 277
Query: 224 EKQNATDSETKTKPKVVVLKEPIKSDEVVLSLQPLSSEQFKVSKTKINELNAIDKKRTDR 403
+ N T ++ K++ + +DE L+ L S + K + +++KKR+D
Sbjct: 278 DIINTTINDLKSQMTI--------TDESSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDL 329
Query: 404 ESALNN 421
ES L +
Sbjct: 330 ESLLKS 335
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 25.0 bits (52), Expect = 7.9
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 56 TVTEDEDKDSTL-SKIGSTISKLFGSDSETPDKADEKPDDTTQETKNKTQNANETTTEKQ 232
+++E+ KDSTL ++ L+ SD+E A E+ ++N+ E+TT+
Sbjct: 209 SLSEESYKDSTLIMQLLRDNLTLWTSDAEYNQSAKEEAPAAAAASENEHPEPKESTTDTV 268
Query: 233 NA 238
A
Sbjct: 269 KA 270
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,961,076
Number of Sequences: 5004
Number of extensions: 34484
Number of successful extensions: 240
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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