Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D03
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    25   0.38 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   1.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   4.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   4.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   6.2  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 399 PRQTHTPEMVESLSPPKRQTEAKACLRILSRRWN 500
           PR    P++V     PKRQ   K C R  ++ +N
Sbjct: 61  PRTPLQPKLVAGKLKPKRQFICKYCNRQFTKSYN 94


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 355 YESYEWTKLDPHSPDTKALLRDYFSW 278
           Y    +   +P SP+ + LL   FSW
Sbjct: 224 YHQENFENYEPKSPEDEELLDAIFSW 249


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 7   HEGELVSSFFVCFLNKKRFIVI 72
           H+GE+ +S+F     K RF+ I
Sbjct: 569 HDGEVDASYFCKLPEKFRFVKI 590


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 157 IYIQ*NCIYYYALFRCTIS 101
           IY+Q N I+ +  F CT S
Sbjct: 16  IYLQHNQIFGFVTFTCTRS 34


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 157 IYIQ*NCIYYYALFRCTIS 101
           IY+Q N I+ +  F CT S
Sbjct: 34  IYLQHNQIFGFVTFTCTRS 52


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 326 PPQPRHQGAAPRLLLLDRHRQGRPQV 249
           P Q +H GAA ++    R R  RP V
Sbjct: 24  PHQHQHYGAAVQVPQGGRRRAARPGV 49


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 397 HELAFPLSPDWQIDYESYEWTKLDPH 320
           HEL    +P  +I  +    +K +PH
Sbjct: 97  HELETKFNPHHEIKLQHLHQSKFNPH 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,526
Number of Sequences: 336
Number of extensions: 1741
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)