Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D03
         (501 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001612-1|AAN71367.1|  460|Drosophila melanogaster RE32823p pro...   164   7e-41
AF148814-1|AAF26671.1|  431|Drosophila melanogaster translation ...   164   7e-41
AF148813-1|AAF26670.1|  360|Drosophila melanogaster translation ...   164   7e-41
AE014297-4355|AAN14165.1|  431|Drosophila melanogaster CG11901-P...   164   7e-41
AE014297-4354|AAF56877.2|  431|Drosophila melanogaster CG11901-P...   164   7e-41

>BT001612-1|AAN71367.1|  460|Drosophila melanogaster RE32823p
           protein.
          Length = 460

 Score =  164 bits (398), Expect = 7e-41
 Identities = 71/91 (78%), Positives = 78/91 (85%)
 Frame = -3

Query: 499 FQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAFPLSPDWQIDYESYEWTKLDPH 320
           FQRLDKMRK AFASVCLFG D +STISG+WVWRG +LAF LSPDWQIDYE Y+W KLD  
Sbjct: 370 FQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAK 429

Query: 319 SPDTKALLRDYFSWTGTDKDGRKFNQGKIFK 227
           S +TK L+  YFSW+GTDKDGRKFNQGKIFK
Sbjct: 430 SEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 460


>AF148814-1|AAF26671.1|  431|Drosophila melanogaster translation
           elongation factor1 gamma protein.
          Length = 431

 Score =  164 bits (398), Expect = 7e-41
 Identities = 71/91 (78%), Positives = 78/91 (85%)
 Frame = -3

Query: 499 FQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAFPLSPDWQIDYESYEWTKLDPH 320
           FQRLDKMRK AFASVCLFG D +STISG+WVWRG +LAF LSPDWQIDYE Y+W KLD  
Sbjct: 341 FQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAK 400

Query: 319 SPDTKALLRDYFSWTGTDKDGRKFNQGKIFK 227
           S +TK L+  YFSW+GTDKDGRKFNQGKIFK
Sbjct: 401 SEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431


>AF148813-1|AAF26670.1|  360|Drosophila melanogaster translation
           elongation factor1 gamma protein.
          Length = 360

 Score =  164 bits (398), Expect = 7e-41
 Identities = 71/91 (78%), Positives = 78/91 (85%)
 Frame = -3

Query: 499 FQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAFPLSPDWQIDYESYEWTKLDPH 320
           FQRLDKMRK AFASVCLFG D +STISG+WVWRG +LAF LSPDWQIDYE Y+W KLD  
Sbjct: 270 FQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAK 329

Query: 319 SPDTKALLRDYFSWTGTDKDGRKFNQGKIFK 227
           S +TK L+  YFSW+GTDKDGRKFNQGKIFK
Sbjct: 330 SEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 360


>AE014297-4355|AAN14165.1|  431|Drosophila melanogaster CG11901-PB,
           isoform B protein.
          Length = 431

 Score =  164 bits (398), Expect = 7e-41
 Identities = 71/91 (78%), Positives = 78/91 (85%)
 Frame = -3

Query: 499 FQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAFPLSPDWQIDYESYEWTKLDPH 320
           FQRLDKMRK AFASVCLFG D +STISG+WVWRG +LAF LSPDWQIDYE Y+W KLD  
Sbjct: 341 FQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAK 400

Query: 319 SPDTKALLRDYFSWTGTDKDGRKFNQGKIFK 227
           S +TK L+  YFSW+GTDKDGRKFNQGKIFK
Sbjct: 401 SEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431


>AE014297-4354|AAF56877.2|  431|Drosophila melanogaster CG11901-PA,
           isoform A protein.
          Length = 431

 Score =  164 bits (398), Expect = 7e-41
 Identities = 71/91 (78%), Positives = 78/91 (85%)
 Frame = -3

Query: 499 FQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAFPLSPDWQIDYESYEWTKLDPH 320
           FQRLDKMRK AFASVCLFG D +STISG+WVWRG +LAF LSPDWQIDYE Y+W KLD  
Sbjct: 341 FQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAK 400

Query: 319 SPDTKALLRDYFSWTGTDKDGRKFNQGKIFK 227
           S +TK L+  YFSW+GTDKDGRKFNQGKIFK
Sbjct: 401 SEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,978,129
Number of Sequences: 53049
Number of extensions: 314503
Number of successful extensions: 1017
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)