Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D02
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   1.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   1.7  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   2.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   5.2  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   9.0  

>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 65  YYCTFDRQQQLENRNIPSI 9
           +YC  DR +QL +RN P +
Sbjct: 64  HYCCPDRSEQLPSRNRPKL 82


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +2

Query: 11   SKECFYFLIVVVCRTYNNIPESKNSNSS----RFVIYL*KMRITRYKKVQKYLKFYYNNF 178
            S E F+ L+     +YN   E K+S+      +   +L K   ++Y K  KY   YY  F
Sbjct: 943  SMETFFDLLDKQYDSYNKHQEYKSSDYYYKYYKQYPHLFKDYFSQYNKNHKYQNDYYEQF 1002

Query: 179  G 181
            G
Sbjct: 1003 G 1003


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 324 IQVPLEELPDPEADSADSHLTLKEQSMRWQENF 422
           I VP E   DPE    D   T+ +Q +    NF
Sbjct: 174 IMVPEEIYVDPEKAKCDIRKTMSKQELALTRNF 206


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 12/67 (17%), Positives = 30/67 (44%)
 Frame = +3

Query: 231 LRKMDSKYRRNGRLIDIVTEEWRADRLPHEDIQVPLEELPDPEADSADSHLTLKEQSMRW 410
           L+  +   +R+ +  +   + W+      E +++ +EEL      + +  + L+EQ    
Sbjct: 789 LKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAAL 848

Query: 411 QENFPEL 431
           Q+   E+
Sbjct: 849 QQRLVEV 855


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 282 LCLSNDRCAGTCYPFFEAAKQNVPSISTW*GWW 184
           +C+S DRC    YP   +A +    I     W+
Sbjct: 169 VCVSLDRCFAVIYPLRVSAARKRGKIMLGGAWF 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,212
Number of Sequences: 2352
Number of extensions: 12126
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)