Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D01
         (261 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004897-1|AAO47875.1|  856|Drosophila melanogaster LD13416p pro...    28   2.1  
AF323978-1|AAL55993.1|  973|Drosophila melanogaster split centra...    28   2.1  
AE014296-93|AAN11442.1|  952|Drosophila melanogaster CG1228-PD, ...    28   2.1  
AE014296-92|AAN11441.1|  952|Drosophila melanogaster CG1228-PC, ...    28   2.1  
AE014296-91|AAF47380.2|  952|Drosophila melanogaster CG1228-PA, ...    28   2.1  
AE014296-85|AAN11443.2|  856|Drosophila melanogaster CG1228-PB, ...    28   2.1  
AY119050-1|AAM50910.1|  444|Drosophila melanogaster LP06762p pro...    26   8.3  
AE014134-1115|AAF52404.1|  464|Drosophila melanogaster CG9596-PA...    26   8.3  
AE014134-1114|AAS64646.1|  444|Drosophila melanogaster CG9596-PB...    26   8.3  

>BT004897-1|AAO47875.1|  856|Drosophila melanogaster LD13416p
           protein.
          Length = 856

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 256 LNITDNVISSKIPNISNTEKLIK*YKIFLELG*ANCM 146
           L I  N++  K+P  SNT+ L+  Y +  ELG  N +
Sbjct: 20  LQIKRNILLGKLPCSSNTQCLLASYTVQSELGDFNAL 56


>AF323978-1|AAL55993.1|  973|Drosophila melanogaster split central
           complex protein.
          Length = 973

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 256 LNITDNVISSKIPNISNTEKLIK*YKIFLELG*ANCM 146
           L I  N++  K+P  SNT+ L+  Y +  ELG  N +
Sbjct: 138 LQIKRNILLGKLPCSSNTQCLLASYTVQSELGDFNAL 174


>AE014296-93|AAN11442.1|  952|Drosophila melanogaster CG1228-PD,
           isoform D protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 256 LNITDNVISSKIPNISNTEKLIK*YKIFLELG*ANCM 146
           L I  N++  K+P  SNT+ L+  Y +  ELG  N +
Sbjct: 138 LQIKRNILLGKLPCSSNTQCLLASYTVQSELGDFNAL 174


>AE014296-92|AAN11441.1|  952|Drosophila melanogaster CG1228-PC,
           isoform C protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 256 LNITDNVISSKIPNISNTEKLIK*YKIFLELG*ANCM 146
           L I  N++  K+P  SNT+ L+  Y +  ELG  N +
Sbjct: 138 LQIKRNILLGKLPCSSNTQCLLASYTVQSELGDFNAL 174


>AE014296-91|AAF47380.2|  952|Drosophila melanogaster CG1228-PA,
           isoform A protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 256 LNITDNVISSKIPNISNTEKLIK*YKIFLELG*ANCM 146
           L I  N++  K+P  SNT+ L+  Y +  ELG  N +
Sbjct: 138 LQIKRNILLGKLPCSSNTQCLLASYTVQSELGDFNAL 174


>AE014296-85|AAN11443.2|  856|Drosophila melanogaster CG1228-PB,
           isoform B protein.
          Length = 856

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 256 LNITDNVISSKIPNISNTEKLIK*YKIFLELG*ANCM 146
           L I  N++  K+P  SNT+ L+  Y +  ELG  N +
Sbjct: 20  LQIKRNILLGKLPCSSNTQCLLASYTVQSELGDFNAL 56


>AY119050-1|AAM50910.1|  444|Drosophila melanogaster LP06762p
           protein.
          Length = 444

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 96  FTQKKYGFISQSNMF*FMQLAYPSSKNILYYFINFSVLLILGIFDDITLSVIFS 257
           ++Q+KY    +   F F+Q+  P+ + +L  F       ++GI  D TLS I S
Sbjct: 148 YSQEKYLLKKEKKYFEFVQIRQPTIRLMLDIFYRQDSEKVMGIRVD-TLSQIIS 200


>AE014134-1115|AAF52404.1|  464|Drosophila melanogaster CG9596-PA,
           isoform A protein.
          Length = 464

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 96  FTQKKYGFISQSNMF*FMQLAYPSSKNILYYFINFSVLLILGIFDDITLSVIFS 257
           ++Q+KY    +   F F+Q+  P+ + +L  F       ++GI  D TLS I S
Sbjct: 148 YSQEKYLLKKEKKYFEFVQIRQPTIRLMLDIFYRQDSEKVMGIRVD-TLSQIIS 200


>AE014134-1114|AAS64646.1|  444|Drosophila melanogaster CG9596-PB,
           isoform B protein.
          Length = 444

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 96  FTQKKYGFISQSNMF*FMQLAYPSSKNILYYFINFSVLLILGIFDDITLSVIFS 257
           ++Q+KY    +   F F+Q+  P+ + +L  F       ++GI  D TLS I S
Sbjct: 148 YSQEKYLLKKEKKYFEFVQIRQPTIRLMLDIFYRQDSEKVMGIRVD-TLSQIIS 200


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,092,048
Number of Sequences: 53049
Number of extensions: 168655
Number of successful extensions: 391
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 24,988,368
effective HSP length: 65
effective length of database: 21,540,183
effective search space used: 452343843
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)