Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_D01
         (261 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   0.62 
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    23   0.82 
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   1.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   2.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   2.5  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    20   4.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   5.8  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    19   7.6  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    19   7.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   7.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   7.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 0.62
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 19  LFIIMYEFLTIFAGIFLLFST 81
           + II+Y  LT  +G+F   ST
Sbjct: 321 VLIIIYTILTYMSGVFYYLST 341


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.6 bits (46), Expect = 0.82
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 7   GKYQLFIIMYEFLTIFAGIFLLFSTMRSFALHR 105
           GKY LF ++   L++   I +L    RS   HR
Sbjct: 300 GKYLLFTMVLVTLSVVVTIAVLNVNFRSPVTHR 332


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 63  ISVVLHYEILCFTQK 107
           I+V+LH +++CF  K
Sbjct: 15  INVLLHGQVICFVCK 29


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = -3

Query: 130 D*EMNPYFFCVKQRIS*WRTTEIY 59
           D E+N Y++ +++ +  W ++  Y
Sbjct: 227 DVELNAYYYYMREMLPYWMSSSQY 250


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = -3

Query: 130 D*EMNPYFFCVKQRIS*WRTTEIY 59
           D E+N Y++ +++ +  W ++  Y
Sbjct: 227 DVELNAYYYYMREMLPYWMSSSQY 250


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 18  VIYNNVRVPYYFCRYISVVLHY 83
           V+YNN    Y        +LHY
Sbjct: 108 VLYNNADGEYGVTTMTKAILHY 129


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 34  YEFLTIFAGIFLLFSTMRSFALHRK 108
           Y F   + G  LL ST + +  HRK
Sbjct: 115 YRFFKPWLGDGLLISTGQKWRNHRK 139


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 103 CVKQRIS*WRTTEIYLQ 53
           CV +RI   + TE+Y++
Sbjct: 72  CVMKRIEMLKGTELYVE 88


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 103 CVKQRIS*WRTTEIYLQ 53
           CV +RI   + TE+Y++
Sbjct: 72  CVMKRIEMLKGTELYVE 88


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 250 ITDNVISSKIPNISNTEKLIK*YKIFLE 167
           +T  VI S+ PN+    K+ K  +I+LE
Sbjct: 479 LTAIVIFSERPNLLEGWKVEKIQEIYLE 506


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.4 bits (38), Expect = 7.6
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +3

Query: 144 FMQLAYPSSKNILYYFINFS 203
           F+ +  P + N+L YF + +
Sbjct: 821 FLDITTPPTPNLLRYFASIA 840


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,770
Number of Sequences: 438
Number of extensions: 1301
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4762122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)