Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C24
         (107 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145596-1|AAD38571.1|  441|Drosophila melanogaster BcDNA.GH0222...    33   0.040
AE014296-1858|AAN11911.1|  441|Drosophila melanogaster CG6404-PB...    33   0.040
AE014296-1857|AAF50127.2|  441|Drosophila melanogaster CG6404-PA...    33   0.040

>AF145596-1|AAD38571.1|  441|Drosophila melanogaster BcDNA.GH02220
           protein.
          Length = 441

 Score = 33.5 bits (73), Expect = 0.040
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -2

Query: 100 FSSVPLGGWXEVGLVPNCLQ 41
           F+S+ LGGW  VG+V NCL+
Sbjct: 123 FASIGLGGWSPVGMVQNCLE 142


>AE014296-1858|AAN11911.1|  441|Drosophila melanogaster CG6404-PB,
           isoform B protein.
          Length = 441

 Score = 33.5 bits (73), Expect = 0.040
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -2

Query: 100 FSSVPLGGWXEVGLVPNCLQ 41
           F+S+ LGGW  VG+V NCL+
Sbjct: 123 FASIGLGGWSPVGMVQNCLE 142


>AE014296-1857|AAF50127.2|  441|Drosophila melanogaster CG6404-PA,
           isoform A protein.
          Length = 441

 Score = 33.5 bits (73), Expect = 0.040
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -2

Query: 100 FSSVPLGGWXEVGLVPNCLQ 41
           F+S+ LGGW  VG+V NCL+
Sbjct: 123 FASIGLGGWSPVGMVQNCLE 142


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,025,000
Number of Sequences: 53049
Number of extensions: 64015
Number of successful extensions: 187
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 24,988,368
effective HSP length: 17
effective length of database: 24,086,535
effective search space used: 433557630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)