Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C23
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.29 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.29 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.38 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   0.66 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   0.66 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   4.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   4.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +2

Query: 221 QSSTYGPYEVTEIGKPNITVSCNDQTCTTTKCDIN 325
           +S+ Y P  +  + +P     CN  T T+ +  +N
Sbjct: 190 ESAVYEPVRIMGVHRPGFDNDCNKNTSTSKEIALN 224


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 155  WITYPFTWWYETGQTP 202
            W T P TWW  T  +P
Sbjct: 1035 WTTKPSTWWSSTTTSP 1050


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +2

Query: 266 PNITVSCNDQTCTTTKCDINGCRNITCTIYDT--DLTGICREYHTIKPEEI 412
           P+ T   N +  T  +CD N C+++     D   D    C   HT K  EI
Sbjct: 404 PSGTNGTNCEIDTINECDSNPCKHLDAICQDKLGDYACYCPPKHTGKNCEI 454



 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 257 IGKPNITVSCNDQTCTTTKCDING 328
           +G   I    ND+ CT T C +NG
Sbjct: 13  LGFSGINCQTNDEDCTETSC-MNG 35


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 12  TYVSRWCIILKVFLWQFFLHVLF 80
           T + R+C +L VFL  FF ++LF
Sbjct: 71  TILQRYCSVLLVFLTYFF-NILF 92


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 12  TYVSRWCIILKVFLWQFFLHVLF 80
           T + R+C +L VFL  FF ++LF
Sbjct: 67  TILQRYCSVLLVFLTYFF-NILF 88


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 343 CNVSTAIYVTFSSSTCLVVARYCYI 269
           C V    ++T +    + V  YCYI
Sbjct: 197 CGVMVVTHITMAHFKIIQVVPYCYI 221


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = -3

Query: 358 IVNSTCNVSTAIYVTFSSSTCLVVARYCY 272
           + NS       ++V  + S C+    YCY
Sbjct: 227 VANSIYGFQNFLFVLSTFSICITQFYYCY 255


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 411 YLHLTNPYQNRFKMAWLARQ 470
           Y HL+NPY +      LAR+
Sbjct: 250 YSHLSNPYPSEEAKEELARK 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,271
Number of Sequences: 336
Number of extensions: 2931
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)