Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_C23
(498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95425-1|CAA64700.1| 1037|Homo sapiens EHK-1 receptor tyrosine k... 34 0.32
L36644-1|AAA74245.1| 991|Homo sapiens receptor protein-tyrosine... 34 0.32
AB209375-1|BAD92612.1| 1017|Homo sapiens ephrin receptor EphA5 i... 34 0.32
BT007262-1|AAP35926.1| 686|Homo sapiens cleft lip and palate as... 29 6.8
BC012359-1|AAH12359.1| 669|Homo sapiens cleft lip and palate as... 29 6.8
BC004865-1|AAH04865.1| 686|Homo sapiens CLPTM1 protein protein. 29 6.8
AK223553-1|BAD97273.1| 669|Homo sapiens cleft lip and palate as... 29 6.8
AF037339-1|AAC98151.1| 669|Homo sapiens cleft lip and palate tr... 29 6.8
AF037338-1|AAC97420.1| 669|Homo sapiens cleft lip and palate tr... 29 6.8
>X95425-1|CAA64700.1| 1037|Homo sapiens EHK-1 receptor tyrosine
kinase protein.
Length = 1037
Score = 33.9 bits (74), Expect = 0.32
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +2
Query: 47 LFVAIFLTCFIHISLSKPTTENDLTEGRGIGSTIWGWITYPFTWWYETGQTPVNDQLVQS 226
L+ + L + L+ P+ E +L + R + + GWI +P W E G+ V++
Sbjct: 40 LWTCLLLCAALRTLLASPSNEVNLLDSRTVMGDL-GWIAFPKNGWEEIGE--VDENYAPI 96
Query: 227 STYGPYEVTEIGKPN 271
TY +V E + N
Sbjct: 97 HTYQVCKVMEQNQNN 111
>L36644-1|AAA74245.1| 991|Homo sapiens receptor protein-tyrosine
kinase protein.
Length = 991
Score = 33.9 bits (74), Expect = 0.32
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +2
Query: 47 LFVAIFLTCFIHISLSKPTTENDLTEGRGIGSTIWGWITYPFTWWYETGQTPVNDQLVQS 226
L+ + L + L+ P+ E +L + R + + GWI +P W E G+ V++
Sbjct: 16 LWTCLLLCAALRTLLASPSNEVNLLDSRTVMGDL-GWIAFPKNGWEEIGE--VDENYAPI 72
Query: 227 STYGPYEVTEIGKPN 271
TY +V E + N
Sbjct: 73 HTYQVCKVMEQNQNN 87
>AB209375-1|BAD92612.1| 1017|Homo sapiens ephrin receptor EphA5
isoform a variant protein.
Length = 1017
Score = 33.9 bits (74), Expect = 0.32
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +2
Query: 47 LFVAIFLTCFIHISLSKPTTENDLTEGRGIGSTIWGWITYPFTWWYETGQTPVNDQLVQS 226
L+ + L + L+ P+ E +L + R + + GWI +P W E G+ V++
Sbjct: 53 LWTCLLLCAALRTLLASPSNEVNLLDSRTVMGDL-GWIAFPKNGWEEIGE--VDENYAPI 109
Query: 227 STYGPYEVTEIGKPN 271
TY +V E + N
Sbjct: 110 HTYQVCKVMEQNQNN 124
>BT007262-1|AAP35926.1| 686|Homo sapiens cleft lip and palate
associated transmembrane protein 1 protein.
Length = 686
Score = 29.5 bits (63), Expect = 6.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 188 TGQTPVNDQLVQ-SSTYGPYEVTEIGKPNITVSCND 292
TG+T + ++++ + YGP EV PNIT++ D
Sbjct: 213 TGETEADPEMIKRAEDYGPVEVISHWHPNITINIVD 248
>BC012359-1|AAH12359.1| 669|Homo sapiens cleft lip and palate
associated transmembrane protein 1 protein.
Length = 669
Score = 29.5 bits (63), Expect = 6.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 188 TGQTPVNDQLVQ-SSTYGPYEVTEIGKPNITVSCND 292
TG+T + ++++ + YGP EV PNIT++ D
Sbjct: 213 TGETEADPEMIKRAEDYGPVEVISHWHPNITINIVD 248
>BC004865-1|AAH04865.1| 686|Homo sapiens CLPTM1 protein protein.
Length = 686
Score = 29.5 bits (63), Expect = 6.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 188 TGQTPVNDQLVQ-SSTYGPYEVTEIGKPNITVSCND 292
TG+T + ++++ + YGP EV PNIT++ D
Sbjct: 213 TGETEADPEMIKRAEDYGPVEVISHWHPNITINIVD 248
>AK223553-1|BAD97273.1| 669|Homo sapiens cleft lip and palate
associated transmembrane protein 1 variant protein.
Length = 669
Score = 29.5 bits (63), Expect = 6.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 188 TGQTPVNDQLVQ-SSTYGPYEVTEIGKPNITVSCND 292
TG+T + ++++ + YGP EV PNIT++ D
Sbjct: 213 TGETEADPEMIKRAEDYGPVEVISHWHPNITINIVD 248
>AF037339-1|AAC98151.1| 669|Homo sapiens cleft lip and palate
transmembrane protein 1 protein.
Length = 669
Score = 29.5 bits (63), Expect = 6.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 188 TGQTPVNDQLVQ-SSTYGPYEVTEIGKPNITVSCND 292
TG+T + ++++ + YGP EV PNIT++ D
Sbjct: 213 TGETEADPEMIKRAEDYGPVEVISHWHPNITINIVD 248
>AF037338-1|AAC97420.1| 669|Homo sapiens cleft lip and palate
transmembrane protein 1 protein.
Length = 669
Score = 29.5 bits (63), Expect = 6.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 188 TGQTPVNDQLVQ-SSTYGPYEVTEIGKPNITVSCND 292
TG+T + ++++ + YGP EV PNIT++ D
Sbjct: 213 TGETEADPEMIKRAEDYGPVEVISHWHPNITINIVD 248
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,443,638
Number of Sequences: 237096
Number of extensions: 1680770
Number of successful extensions: 3210
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3207
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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