Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C19
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   1.6  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   2.8  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   6.6  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   6.6  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 310 LFERSSVLTTLMEP*GVSPKGRMFCSGPKY 221
           ++E SS  TTL  P   S +     SGP Y
Sbjct: 726 MYETSSTTTTLTPPPSESGRETPLLSGPSY 755


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 127 IEGCSSSEAVSTLHQRGAARKLGASVEL 210
           I+GCS  E++  L  R A R+L  +  L
Sbjct: 841 IDGCSRIESIQRLFTRVAFRRLFGAASL 868


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 255  QKGECSVVVQNIAGYQLNRGTKFSCCS 175
            +KG       N A YQL R ++ + C+
Sbjct: 1847 RKGFAGAEANNAANYQLKRDSETTLCA 1873


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +1

Query: 316 PTKHMLLEKYYDLDDAVIRELLGRKLSSR 402
           P  H+LL    D+D A +++++   +  R
Sbjct: 344 PRDHLLLPLSRDVDSAALKDIIQEVIGER 372


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,834
Number of Sequences: 2352
Number of extensions: 8822
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)