Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C18
         (415 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    26   0.13 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.29 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   2.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   6.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   8.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   8.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   8.3  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 26.2 bits (55), Expect = 0.13
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +2

Query: 89  NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTR 217
           N +C+   L+   KP+ + E    SC  + T  N  + C  T+
Sbjct: 118 NGECIDKELFCNGKPDCKDESDENSC-TVETDPNRALDCDPTQ 159


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.0 bits (52), Expect = 0.29
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +2

Query: 89  NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTR 217
           N +C+   L+   KP+ + E    SC  + T  N    C  T+
Sbjct: 125 NGECIDKELFCNGKPDCKDESDENSC-TVETDPNRAPDCDPTQ 166


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 121 VGQAGVQIGNACWELYCLEHGIQPDGQMPTD 213
           +G+  V +    W LYC   G  P GQ+  D
Sbjct: 345 LGELAVCVNERPWSLYC---GEPPCGQLNPD 372


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = -3

Query: 287 RGTCLPAPVSLKNVLKESSPPPMV-LSVGI*PSGWMPCSRQYSSQQAFPIWTPAWPTCT 114
           RGT L    +  N L   SPPP+   +VG     W    +   S  + P   P   T T
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQGAPSPSSTPSSLPTQRTST 91


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -2

Query: 255 EERVEGVVSTPDGLVSWHLTIRLDAVLKAIQLP 157
           ++ ++G+ ++   ++ WH+T      L+  QLP
Sbjct: 235 KKHIDGMAASKLNVLHWHITDSQSFPLELPQLP 267


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 18  SLLTGRAERRLINLFYLHLS 77
           +LL GR+ +  +N F  HL+
Sbjct: 48  TLLFGRSRKSRMNYFITHLA 67



 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 154 CWELYCLEHGIQPDGQMPTDKT 219
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 395 RHHPYQ**VVLDETTVCMC 339
           R HP+      D  TVC C
Sbjct: 761 RFHPFLIPTGFDSCTVCTC 779


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 184 CRAQGNTAPSRHFRSGLRLGQRVQRCTH 101
           CR +      R+F    RL  R +RC +
Sbjct: 590 CRPREQLTWRRNFHGPHRLAARSRRCCY 617


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 184 CRAQGNTAPSRHFRSGLRLGQRVQRCTH 101
           CR +      R+F    RL  R +RC +
Sbjct: 482 CRPREQLTWRRNFHGPHRLAARSRRCCY 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,295
Number of Sequences: 336
Number of extensions: 2377
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)