Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C17
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       24   0.84 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   4.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   5.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   7.8  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 173 SWYFDIVNNIV-SIIFYCSEIINLQFISACQNKLSYNTYTHD 51
           +W   +V ++  +I+F+     N+ + S C    ++ TYTH+
Sbjct: 160 AWIGSVVCSLPQTIVFHLETHPNVTWYSQCVTFNAFPTYTHE 201


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 141 DNVVDYIEIPALESTRKGRILWPYPYVNYTE 233
           D V   + + + ++ + GR+L PYP  ++ E
Sbjct: 85  DGVPSTLNVISGKTGKGGRLLKPYPDWSFAE 115


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/41 (21%), Positives = 17/41 (41%)
 Frame = -3

Query: 272 WILRCIFFNNVGRFCIIYIRIRPQYSAFSGTL*SWYFDIVN 150
           WI  CI +  + +    Y  +  +Y A       W F +++
Sbjct: 66  WIFSCIGYYKLNKIHDAYKDLNQRYGALCKEEALWNFPMIS 106


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 182 YQKRPNIVAVSLCKL 226
           +Q+ P ++ VSLCK+
Sbjct: 102 WQQYPWVLGVSLCKI 116


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,176
Number of Sequences: 438
Number of extensions: 2496
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)