Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C14
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   3.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   3.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   3.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   3.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    20   9.1  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 304 VFVFETCVHVIIPTVLVILVCCNLDSITLQTRVM 405
           VF+  TC HV+     VI    ++D I    R++
Sbjct: 5   VFLVLTCAHVVFLEEYVIPDNIDIDDILSNERLL 38


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 354 HQNSRYNNMHTC 319
           HQ + YN ++TC
Sbjct: 88  HQGASYNTLNTC 99


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
 Frame = +1

Query: 328  HVIIPTVLVILVCC---NLDSITLQTRVMTVVNWSNP 429
            +V +P++ ++LV     N+++++  TR +TVV   +P
Sbjct: 1009 YVTVPSMYLLLVIYSVFNMNNVSWGTREVTVVPKPDP 1045


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
 Frame = +1

Query: 328  HVIIPTVLVILVCC---NLDSITLQTRVMTVVNWSNP 429
            +V +P++ ++LV     N+++++  TR +TVV   +P
Sbjct: 1009 YVTVPSMYLLLVIYSVFNMNNVSWGTREVTVVPKPDP 1045


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 239 FYFDFYIT 262
           FYF FYIT
Sbjct: 56  FYFSFYIT 63


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/36 (19%), Positives = 18/36 (50%)
 Frame = +1

Query: 265 ISEYNLYMG*IQIVFVFETCVHVIIPTVLVILVCCN 372
           I   N + G   ++ +F   +H+++    +++  CN
Sbjct: 260 IEAINGFYGVHTLLILFSCLLHLVVTPYYLLIEVCN 295


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 239 FYFDFYIT 262
           FYF FYIT
Sbjct: 56  FYFSFYIT 63


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 285 YGLNTNCFR 311
           +G+NT CFR
Sbjct: 183 FGINTYCFR 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,926
Number of Sequences: 336
Number of extensions: 1883
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)