Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C13
         (472 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   4.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.3  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   5.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   5.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   5.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.6  

>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 389 VMNFGLFLQDGWMQWSEAVSSLGCLN 312
           + +FG  ++D   +W+E  +S+G  N
Sbjct: 3   IESFGYTMRDIRYKWNEGPNSVGVSN 28


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 203 PQNGANRRCLASKRAMKSFHSVTC 132
           P +  +R C+  K AM    +V C
Sbjct: 427 PFSAGSRNCIGQKFAMLEIKTVLC 450


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 203 PQNGANRRCLASKRAMKSFHSVTC 132
           P +  +R C+  K AM    +V C
Sbjct: 427 PFSAGSRNCIGQKFAMLEIKTVLC 450


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 346 HCIHPSCKN 372
           HC H +CKN
Sbjct: 147 HCDHTTCKN 155


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 118 DAHLSHVTEWKDFIARLEARHLLFA 192
           D  L H+  + DF+  L+    +FA
Sbjct: 271 DLELKHIENFNDFVTALKDNVPVFA 295


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 118 DAHLSHVTEWKDFIARLEARHLLFA 192
           D  L H+  + DF+  L+    +FA
Sbjct: 271 DLELKHIENFNDFVTALKDNVPVFA 295


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 118 DAHLSHVTEWKDFIARLEARHLLFA 192
           D  L H+  + DF+  L+    +FA
Sbjct: 591 DLELKHIENFNDFVTALKDNVPVFA 615


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 119 MRIYRMSLSGKISSHV 166
           +RIY+  LSGK   H+
Sbjct: 78  LRIYQTLLSGKNHPHI 93


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
 Frame = -3

Query: 200 QNGANRRCLASKRAMKSFHSVTCDRCASR----SFVDF*NIWSCV----LSSNAVMSLTA 45
           +NG +   L   R       +TC++C ++     FVD  +I  CV    + SN    L  
Sbjct: 615 KNGDSSSLLDKMRDSSGAGRITCEKCGNKIDTSLFVD--HIRQCVGGGTIGSNQRNFLKN 672

Query: 44  ASRFSVIFSPANP 6
           A   + I  P +P
Sbjct: 673 ALMSNNILPPESP 685


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,961
Number of Sequences: 336
Number of extensions: 1860
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)