Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C13
         (472 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    27   0.44 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   0.58 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.1  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.1  

>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 193 PFCGEIPCEDSIKNDSA-RTEDDPTTDVKGPAMGAKS-LCIP 312
           P CG+  C +  KNDSA R   +P    +G  +  KS  C+P
Sbjct: 72  PACGDRTCTNQRKNDSACRRSCNPGCFCRGGYVRNKSNRCVP 113


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.2 bits (55), Expect = 0.58
 Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +1

Query: 22  KMTLKRDAAVNDITALLERTHDQMFQKSTKERDAHLSHVTEWKD--FIARL 168
           K+  K+DA +N++ A++    +   +K  KER+ ++      +D  ++ RL
Sbjct: 183 KLIEKKDAKLNELYAVIREEIEPKLEKLRKEREHYIEFQKVCRDIEYLTRL 233


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +1

Query: 223 SIKNDSARTEDDPTTD--VKGPAMGAKSLCIPFKQPRELTASDHCI 354
           ++K+      + PTT   + G  +     C+  + PR+  A D CI
Sbjct: 543 NVKDGRFCVAECPTTKHAMNGTCINCHKTCVGCRGPRDTIAPDGCI 588


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +1

Query: 355  HPSCKNKPKFITLF-GRSY 408
            HPSC    KF+  F G++Y
Sbjct: 1657 HPSCAVSNKFVNTFDGKTY 1675


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,313
Number of Sequences: 2352
Number of extensions: 8433
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)