SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C13
         (472 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X54326-1|CAA38224.1| 1440|Homo sapiens glutaminyl-tRNA synthetas...    96   6e-20
BC126275-1|AAI26276.1| 1512|Homo sapiens EPRS protein protein.         96   6e-20
AY493416-1|AAS72877.1| 1440|Homo sapiens proliferation-inducing ...    96   6e-20
BX537764-1|CAD97829.1| 1546|Homo sapiens hypothetical protein pr...    29   8.1  
BC125189-1|AAI25190.1|  752|Homo sapiens zinc finger protein 425...    29   8.1  
BC115703-1|AAI15704.1| 1529|Homo sapiens gon-4-like (C. elegans)...    29   8.1  
BC114629-1|AAI14630.1| 1529|Homo sapiens gon-4-like (C. elegans)...    29   8.1  
BC039654-1|AAH39654.1|  623|Homo sapiens TBCD protein protein.         29   8.1  
BC012824-1|AAH12824.2|  387|Homo sapiens TBCD protein protein.         29   8.1  
BC003094-1|AAH03094.1| 1192|Homo sapiens tubulin folding cofacto...    29   8.1  
AY621067-1|AAT40438.1|  752|Homo sapiens zinc finger protein 425...    29   8.1  
AY335492-1|AAR01262.1| 1529|Homo sapiens GON4L isoform B protein.      29   8.1  
AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein.      29   8.1  
AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein.      29   8.1  
AL139128-5|CAH69947.1| 1529|Homo sapiens gon-4-like (C. elegans)...    29   8.1  
AL133562-1|CAB63716.1| 1050|Homo sapiens hypothetical protein pr...    29   8.1  
AK098734-1|BAC05397.1|  241|Homo sapiens protein ( Homo sapiens ...    29   8.1  
AB195688-1|BAF51557.1|  970|Homo sapiens YY1AP-related protein2 ...    29   8.1  
AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1 ...    29   8.1  
AB023205-1|BAA76832.2| 1210|Homo sapiens KIAA0988 protein protein.     29   8.1  

>X54326-1|CAA38224.1| 1440|Homo sapiens glutaminyl-tRNA synthetase
            protein.
          Length = 1440

 Score = 95.9 bits (228), Expect = 6e-20
 Identities = 52/131 (39%), Positives = 75/131 (57%)
 Frame = +1

Query: 16   GEKMTLKRDAAVNDITALLERTHDQMFQKSTKERDAHLSHVTEWKDFIARLEARHLLFAP 195
            GEK+T+  + A   + A+LE     +F +++++   H+      +DF   L++  ++  P
Sbjct: 1315 GEKLTVAENEAETKLQAILEDIQVTLFTRASEDLKTHMVVANTMEDFQKILDSGKIVQIP 1374

Query: 196  FCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCIHPSCKNK 375
            FCGEI CED IK  +AR +D    +   P+MGAKSLCIPFK   EL     C+    KN 
Sbjct: 1375 FCGEIDCEDWIKKTTARDQD---LEPGAPSMGAKSLCIPFKPLCELQPGAKCV--CGKNP 1429

Query: 376  PKFITLFGRSY 408
             K+ TLFGRSY
Sbjct: 1430 AKYYTLFGRSY 1440


>BC126275-1|AAI26276.1| 1512|Homo sapiens EPRS protein protein.
          Length = 1512

 Score = 95.9 bits (228), Expect = 6e-20
 Identities = 52/131 (39%), Positives = 75/131 (57%)
 Frame = +1

Query: 16   GEKMTLKRDAAVNDITALLERTHDQMFQKSTKERDAHLSHVTEWKDFIARLEARHLLFAP 195
            GEK+T+  + A   + A+LE     +F +++++   H+      +DF   L++  ++  P
Sbjct: 1387 GEKLTVAENEAETKLQAILEDIQVTLFTRASEDLKTHMVVANTMEDFQKILDSGKIVQIP 1446

Query: 196  FCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCIHPSCKNK 375
            FCGEI CED IK  +AR +D    +   P+MGAKSLCIPFK   EL     C+    KN 
Sbjct: 1447 FCGEIDCEDWIKKTTARDQD---LEPGAPSMGAKSLCIPFKPLCELQPGAKCV--CGKNP 1501

Query: 376  PKFITLFGRSY 408
             K+ TLFGRSY
Sbjct: 1502 AKYYTLFGRSY 1512


>AY493416-1|AAS72877.1| 1440|Homo sapiens proliferation-inducing
            protein 32 protein.
          Length = 1440

 Score = 95.9 bits (228), Expect = 6e-20
 Identities = 52/131 (39%), Positives = 75/131 (57%)
 Frame = +1

Query: 16   GEKMTLKRDAAVNDITALLERTHDQMFQKSTKERDAHLSHVTEWKDFIARLEARHLLFAP 195
            GEK+T+  + A   + A+LE     +F +++++   H+      +DF   L++  ++  P
Sbjct: 1315 GEKLTVAENEAETKLQAILEDIQVTLFTRASEDLKTHMVVANTMEDFQKILDSGKIVQIP 1374

Query: 196  FCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCIHPSCKNK 375
            FCGEI CED IK  +AR +D    +   P+MGAKSLCIPFK   EL     C+    KN 
Sbjct: 1375 FCGEIDCEDWIKKTTARDQD---LEPGAPSMGAKSLCIPFKPLCELQPGAKCV--CGKNP 1429

Query: 376  PKFITLFGRSY 408
             K+ TLFGRSY
Sbjct: 1430 AKYYTLFGRSY 1440


>BX537764-1|CAD97829.1| 1546|Homo sapiens hypothetical protein
           protein.
          Length = 1546

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 HL-LFAPFCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCI 354
           HL L  PF GE P E+ +K +  + + +   ++     G++S   P  QPR+ T  D C 
Sbjct: 166 HLTLKEPFSGE-PSEE-VKEEGGKPQMNSEGEIPSLPSGSQS-AKPVSQPRKSTQPDVCA 222

Query: 355 HPSCK 369
            P  K
Sbjct: 223 SPQEK 227


>BC125189-1|AAI25190.1|  752|Homo sapiens zinc finger protein 425
           protein.
          Length = 752

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +2

Query: 89  RCFRSQQKNAMRIYRMSLSGKISSHV*RQGIFCSRRSAGKYHARTVS 229
           RCFR   K  M+++    SGK   H    G   SR++A K H RT S
Sbjct: 337 RCFRL--KRGMKVHLTQHSGKRPFHCPECGRSFSRKAALKTHQRTHS 381


>BC115703-1|AAI15704.1| 1529|Homo sapiens gon-4-like (C. elegans)
           protein.
          Length = 1529

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 HL-LFAPFCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCI 354
           HL L  PF GE P E+ +K +  + + +   ++     G++S   P  QPR+ T  D C 
Sbjct: 149 HLTLKEPFSGE-PSEE-VKEEGGKPQMNSEGEIPSLPSGSQS-AKPVSQPRKSTQPDVCA 205

Query: 355 HPSCK 369
            P  K
Sbjct: 206 SPQEK 210


>BC114629-1|AAI14630.1| 1529|Homo sapiens gon-4-like (C. elegans)
           protein.
          Length = 1529

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 HL-LFAPFCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCI 354
           HL L  PF GE P E+ +K +  + + +   ++     G++S   P  QPR+ T  D C 
Sbjct: 149 HLTLKEPFSGE-PSEE-VKEEGGKPQMNSEGEIPSLPSGSQS-AKPVSQPRKSTQPDVCA 205

Query: 355 HPSCK 369
            P  K
Sbjct: 206 SPQEK 210


>BC039654-1|AAH39654.1|  623|Homo sapiens TBCD protein protein.
          Length = 623

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = -2

Query: 384 ELWLVFARRMDAVVRGGQFSGLFERNAQALGAHRWTFHVCSGIVFSPGAVVLDTV 220
           EL  +F R   A V     S  F R  Q LG   + +HV  G+V S G +   T+
Sbjct: 375 ELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTI 429


>BC012824-1|AAH12824.2|  387|Homo sapiens TBCD protein protein.
          Length = 387

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = -2

Query: 384 ELWLVFARRMDAVVRGGQFSGLFERNAQALGAHRWTFHVCSGIVFSPGAVVLDTV 220
           EL  +F R   A V     S  F R  Q LG   + +HV  G+V S G +   T+
Sbjct: 139 ELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTI 193


>BC003094-1|AAH03094.1| 1192|Homo sapiens tubulin folding cofactor D
            protein.
          Length = 1192

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = -2

Query: 384  ELWLVFARRMDAVVRGGQFSGLFERNAQALGAHRWTFHVCSGIVFSPGAVVLDTV 220
            EL  +F R   A V     S  F R  Q LG   + +HV  G+V S G +   T+
Sbjct: 944  ELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTI 998


>AY621067-1|AAT40438.1|  752|Homo sapiens zinc finger protein 425
           protein.
          Length = 752

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +2

Query: 89  RCFRSQQKNAMRIYRMSLSGKISSHV*RQGIFCSRRSAGKYHARTVS 229
           RCFR   K  M+++    SGK   H    G   SR++A K H RT S
Sbjct: 337 RCFRL--KRGMKVHLTQHSGKRPFHCPECGRSFSRKAALKTHQRTHS 381


>AY335492-1|AAR01262.1| 1529|Homo sapiens GON4L isoform B protein.
          Length = 1529

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 HL-LFAPFCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCI 354
           HL L  PF GE P E+ +K +  + + +   ++     G++S   P  QPR+ T  D C 
Sbjct: 149 HLTLKEPFSGE-PSEE-VKEEGGKPQMNSEGEIPSLPSGSQS-AKPVSQPRKSTQPDVCA 205

Query: 355 HPSCK 369
            P  K
Sbjct: 206 SPQEK 210


>AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein.
          Length = 2241

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 HL-LFAPFCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCI 354
           HL L  PF GE P E+ +K +  + + +   ++     G++S   P  QPR+ T  D C 
Sbjct: 149 HLTLKEPFSGE-PSEE-VKEEGGKPQMNSEGEIPSLPSGSQS-AKPVSQPRKSTQPDVCA 205

Query: 355 HPSCK 369
            P  K
Sbjct: 206 SPQEK 210


>AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein.
          Length = 2241

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 HL-LFAPFCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCI 354
           HL L  PF GE P E+ +K +  + + +   ++     G++S   P  QPR+ T  D C 
Sbjct: 149 HLTLKEPFSGE-PSEE-VKEEGGKPQMNSEGEIPSLPSGSQS-AKPVSQPRKSTQPDVCA 205

Query: 355 HPSCK 369
            P  K
Sbjct: 206 SPQEK 210


>AL139128-5|CAH69947.1| 1529|Homo sapiens gon-4-like (C. elegans)
           protein.
          Length = 1529

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 HL-LFAPFCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCI 354
           HL L  PF GE P E+ +K +  + + +   ++     G++S   P  QPR+ T  D C 
Sbjct: 149 HLTLKEPFSGE-PSEE-VKEEGGKPQMNSEGEIPSLPSGSQS-AKPVSQPRKSTQPDVCA 205

Query: 355 HPSCK 369
            P  K
Sbjct: 206 SPQEK 210


>AL133562-1|CAB63716.1| 1050|Homo sapiens hypothetical protein
           protein.
          Length = 1050

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = -2

Query: 384 ELWLVFARRMDAVVRGGQFSGLFERNAQALGAHRWTFHVCSGIVFSPGAVVLDTV 220
           EL  +F R   A V     S  F R  Q LG   + +HV  G+V S G +   T+
Sbjct: 802 ELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTI 856


>AK098734-1|BAC05397.1|  241|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25868 fis, clone CBR02068. ).
          Length = 241

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 HL-LFAPFCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCI 354
           HL L  PF GE P E+ +K +  + + +   ++     G++S   P  QPR+ T  D C 
Sbjct: 149 HLTLKEPFSGE-PSEE-VKEEGGKPQMNSEGEIPSLPSGSQS-AKPVSQPRKSTQPDVCA 205

Query: 355 HPSCK 369
            P  K
Sbjct: 206 SPQEK 210


>AB195688-1|BAF51557.1|  970|Homo sapiens YY1AP-related protein2
           protein.
          Length = 970

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 HL-LFAPFCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCI 354
           HL L  PF GE P E+ +K +  + + +   ++     G++S   P  QPR+ T  D C 
Sbjct: 149 HLTLKEPFSGE-PSEE-VKEEGGKPQMNSEGEIPSLPSGSQS-AKPVSQPRKSTQPDVCA 205

Query: 355 HPSCK 369
            P  K
Sbjct: 206 SPQEK 210


>AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1
           protein.
          Length = 2240

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 HL-LFAPFCGEIPCEDSIKNDSARTEDDPTTDVKGPAMGAKSLCIPFKQPRELTASDHCI 354
           HL L  PF GE P E+ +K +  + + +   ++     G++S   P  QPR+ T  D C 
Sbjct: 149 HLTLKEPFSGE-PSEE-VKEEGGKPQMNSEGEIPSLPSGSQS-AKPVSQPRKSTQPDVCA 205

Query: 355 HPSCK 369
            P  K
Sbjct: 206 SPQEK 210


>AB023205-1|BAA76832.2| 1210|Homo sapiens KIAA0988 protein protein.
          Length = 1210

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = -2

Query: 384  ELWLVFARRMDAVVRGGQFSGLFERNAQALGAHRWTFHVCSGIVFSPGAVVLDTV 220
            EL  +F R   A V     S  F R  Q LG   + +HV  G+V S G +   T+
Sbjct: 962  ELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTI 1016


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,316,268
Number of Sequences: 237096
Number of extensions: 1190307
Number of successful extensions: 6463
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6457
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -