Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_C12
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 342 5e-94
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 342 5e-94
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 342 5e-94
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 342 5e-94
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 342 5e-94
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 342 5e-94
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 342 5e-94
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 340 2e-93
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 334 2e-91
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 334 2e-91
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 334 2e-91
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 334 2e-91
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 334 2e-91
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 332 8e-91
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 320 2e-87
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 305 8e-83
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 302 5e-82
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 6e-25
BC064028-1|AAH64028.1| 237|Homo sapiens immediate early respons... 33 0.63
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 33 1.1
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 32 1.9
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 32 1.9
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 32 1.9
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 32 1.9
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.9
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 1.9
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 32 1.9
BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein. 31 3.3
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 4.4
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 4.4
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 4.4
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 4.4
U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosyl... 30 5.8
AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA glycos... 30 5.8
BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S. cerevis... 30 7.7
BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein. 30 7.7
BC011543-1|AAH11543.1| 328|Homo sapiens FIP1L1 protein protein. 30 7.7
AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processi... 30 7.7
AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy c... 30 7.7
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 7.7
AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy ch... 30 7.7
AB002355-1|BAA21573.2| 2992|Homo sapiens KIAA0357 protein. 30 7.7
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 342 bits (841), Expect = 5e-94
Identities = 152/195 (77%), Positives = 173/195 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKV+D++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+TGG NLGR+G I
Sbjct: 181 CMVTGGANLGRIGVI 195
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 342 bits (841), Expect = 5e-94
Identities = 152/195 (77%), Positives = 173/195 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKV+D++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+TGG NLGR+G I
Sbjct: 181 CMVTGGANLGRIGVI 195
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 342 bits (841), Expect = 5e-94
Identities = 152/195 (77%), Positives = 173/195 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKV+D++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+TGG NLGR+G I
Sbjct: 181 CMVTGGANLGRIGVI 195
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 342 bits (841), Expect = 5e-94
Identities = 152/195 (77%), Positives = 173/195 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKV+D++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+TGG NLGR+G I
Sbjct: 181 CMVTGGANLGRIGVI 195
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 342 bits (841), Expect = 5e-94
Identities = 152/195 (77%), Positives = 173/195 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKV+D++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+TGG NLGR+G I
Sbjct: 181 CMVTGGANLGRIGVI 195
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 342 bits (841), Expect = 5e-94
Identities = 152/195 (77%), Positives = 173/195 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKV+D++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+TGG NLGR+G I
Sbjct: 181 CMVTGGANLGRIGVI 195
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 342 bits (841), Expect = 5e-94
Identities = 152/195 (77%), Positives = 173/195 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKV+D++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+TGG NLGR+G I
Sbjct: 181 CMVTGGANLGRIGVI 195
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 340 bits (836), Expect = 2e-93
Identities = 151/195 (77%), Positives = 172/195 (88%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKV+D++Q+D+ T KI DFIKFD+GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+TGG NLGR+G I
Sbjct: 181 CMVTGGANLGRIGVI 195
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 334 bits (820), Expect = 2e-91
Identities = 148/195 (75%), Positives = 171/195 (87%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKV+D+VQ+D+ T KI++FIKFD+GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+ GG NLGRVG I
Sbjct: 181 CMVIGGANLGRVGVI 195
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 334 bits (820), Expect = 2e-91
Identities = 148/195 (75%), Positives = 171/195 (87%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKV+D+VQ+D+ T KI++FIKFD+GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+ GG NLGRVG I
Sbjct: 181 CMVIGGANLGRVGVI 195
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 334 bits (820), Expect = 2e-91
Identities = 148/195 (75%), Positives = 171/195 (87%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKV+D+VQ+D+ T KI++FIKFD+GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+ GG NLGRVG I
Sbjct: 181 CMVIGGANLGRVGVI 195
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 334 bits (820), Expect = 2e-91
Identities = 148/195 (75%), Positives = 171/195 (87%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKV+D+VQ+D+ T KI++FIKFD+GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+ GG NLGRVG I
Sbjct: 181 CMVIGGANLGRVGVI 195
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 334 bits (820), Expect = 2e-91
Identities = 148/195 (75%), Positives = 171/195 (87%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDP+IKV+D+VQ+D+ T KI++FIKFD+GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CM+ GG NLGRVG I
Sbjct: 181 CMVIGGANLGRVGVI 195
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 332 bits (815), Expect = 8e-91
Identities = 147/194 (75%), Positives = 170/194 (87%)
Frame = +2
Query: 44 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 223
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 224 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 403
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 404 KLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNLC 583
KLCKVR++ G K +P+LVTHD RT+RYPDP+IKV+D+VQ+D+ T KI++FIKFD+GNLC
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 584 MITGGRNLGRVGTI 625
M+ GG NLGRVG I
Sbjct: 181 MVIGGANLGRVGVI 194
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 320 bits (787), Expect = 2e-87
Identities = 142/195 (72%), Positives = 166/195 (85%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAK
Sbjct: 61 VKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKVR++ G K +P+LVTHD RT+RYPDPLIKV+D+VQ+D+ T KI FIKFD+GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 581 CMITGGRNLGRVGTI 625
CM+ G NLGRVG I
Sbjct: 181 CMVIAGANLGRVGVI 195
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 305 bits (749), Expect = 8e-83
Identities = 135/175 (77%), Positives = 155/175 (88%)
Frame = +2
Query: 101 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 280
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 281 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLV 460
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 461 THDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTI 625
THD RT+RYPDPLIKV+D++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+G I
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVI 175
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 302 bits (742), Expect = 5e-82
Identities = 136/177 (76%), Positives = 156/177 (88%)
Frame = +2
Query: 95 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 274
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 275 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPY 454
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 455 LVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTI 625
LVTHD RT+RYPDPLIKV+D++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+G I
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVI 176
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 6e-25
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 208
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>BC064028-1|AAH64028.1| 237|Homo sapiens immediate early response
5-like protein.
Length = 237
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 511 RLGAARHLHQQDHGLHQVRLRQPLHDHR 594
R AARH Q H LHQ+ L+Q LH H+
Sbjct: 103 RESAARHQLHQLHQLHQLHLQQQLHQHQ 130
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 520 AARHLHQQDHGLHQVRLRQPLHDHR 594
AARH Q H LHQ+ L+Q LH H+
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQ 130
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 415 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 543
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 415 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 543
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 415 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 543
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 415 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 543
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 281 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 427
+YPA + D I + E+FRL+ + + RI + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +1
Query: 427 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 528
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 415 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 543
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 427 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRR-Q 600
RDR +ER + R H+P P + E R ++ + H+ R R+ H RR +
Sbjct: 440 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREREERHRERRHR 499
Query: 601 ESGSRRH 621
E RH
Sbjct: 500 EKEETRH 506
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 30.7 bits (66), Expect = 4.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 391 RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQG 507
R ++ G ARR R +VPG ARR PGPA +G
Sbjct: 257 RLSPESAPGPARRGRA---SVPGPARRGCDSAPGPARRG 292
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 122 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 289
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 290 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 382
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 30.7 bits (66), Expect = 4.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 281 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 427
+YPA + D I + E+FRL+ + + +I + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 122 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 289
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 290 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 382
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
>U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosylase
protein.
Length = 351
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 168 GKHSRSLWGPVEGRGAYTPPSL 103
G RSLWGP G TPPSL
Sbjct: 300 GNFFRSLWGPYAGWAQATPPSL 321
>AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA
glycosylase protein.
Length = 341
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 168 GKHSRSLWGPVEGRGAYTPPSL 103
G RSLWGP G TPPSL
Sbjct: 290 GNFFRSLWGPYAGWAQATPPSL 311
>BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S.
cerevisiae) protein.
Length = 594
Score = 29.9 bits (64), Expect = 7.7
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 427 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRR-Q 600
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR +
Sbjct: 475 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 534
Query: 601 ESGSRRH 621
E RH
Sbjct: 535 EKEETRH 541
>BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 29.9 bits (64), Expect = 7.7
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 427 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRR-Q 600
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR +
Sbjct: 440 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 499
Query: 601 ESGSRRH 621
E RH
Sbjct: 500 EKEETRH 506
>BC011543-1|AAH11543.1| 328|Homo sapiens FIP1L1 protein protein.
Length = 328
Score = 29.9 bits (64), Expect = 7.7
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 427 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRR-Q 600
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR +
Sbjct: 209 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 268
Query: 601 ESGSRRH 621
E RH
Sbjct: 269 EKEETRH 275
>AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processing
factor FIP1 protein.
Length = 594
Score = 29.9 bits (64), Expect = 7.7
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 427 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRR-Q 600
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR +
Sbjct: 475 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 534
Query: 601 ESGSRRH 621
E RH
Sbjct: 535 EKEETRH 541
>AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy chain
9 protein.
Length = 4486
Score = 29.9 bits (64), Expect = 7.7
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 389 EEAKYKLCKVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVSDSVQLDISTN-KIMDF 556
E+A +C + R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 2801 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 2860
Query: 557 IKFDSGNLCMITGGRNLGRV 616
K D +LC+ G +NL V
Sbjct: 2861 -KMDLASLCLKAGVKNLNTV 2879
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 7.7
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 272 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATG 436
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy chain 9
protein.
Length = 4486
Score = 29.9 bits (64), Expect = 7.7
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 389 EEAKYKLCKVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVSDSVQLDISTN-KIMDF 556
E+A +C + R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 2801 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 2860
Query: 557 IKFDSGNLCMITGGRNLGRV 616
K D +LC+ G +NL V
Sbjct: 2861 -KMDLASLCLKAGVKNLNTV 2879
>AB002355-1|BAA21573.2| 2992|Homo sapiens KIAA0357 protein.
Length = 2992
Score = 29.9 bits (64), Expect = 7.7
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 389 EEAKYKLCKVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVSDSVQLDISTN-KIMDF 556
E+A +C + R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 1383 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 1442
Query: 557 IKFDSGNLCMITGGRNLGRV 616
K D +LC+ G +NL V
Sbjct: 1443 -KMDLASLCLKAGVKNLNTV 1461
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,472,428
Number of Sequences: 237096
Number of extensions: 2143874
Number of successful extensions: 15028
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 14744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15027
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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