Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_C12
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 347 6e-96
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 347 6e-96
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 347 6e-96
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 342 3e-94
AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,... 31 0.97
Y07662-1|CAA68943.1| 949|Drosophila melanogaster GATA factor pr... 31 1.7
AY069823-1|AAL39968.1| 950|Drosophila melanogaster SD07261p pro... 31 1.7
AE014297-2131|AAF55261.2| 1264|Drosophila melanogaster CG3992-PA... 31 1.7
AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB... 31 1.7
AE014297-4823|AAF57207.1| 1844|Drosophila melanogaster CG1976-PA... 30 2.9
AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece... 29 5.1
AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p pro... 29 5.1
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ... 29 5.1
AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC... 29 5.1
AE014296-611|AAS64955.1| 958|Drosophila melanogaster CG11505-PC... 29 5.1
AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA... 29 5.1
AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB... 29 5.1
AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-P... 29 5.1
AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA... 29 6.8
BT025212-1|ABF17903.1| 1189|Drosophila melanogaster FI01101p pro... 28 9.0
BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p pro... 28 9.0
AF145661-1|AAD38636.1| 1189|Drosophila melanogaster BcDNA.GH1064... 28 9.0
AE014298-1293|AAF46457.1| 1189|Drosophila melanogaster CG12218-P... 28 9.0
AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA... 28 9.0
AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC... 28 9.0
AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 28 9.0
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 347 bits (854), Expect = 6e-96
Identities = 157/195 (80%), Positives = 176/195 (90%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI +DSVQ+DI++ KI D+IKFDSGNL
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CMITGGRNLGRVGT+
Sbjct: 181 CMITGGRNLGRVGTV 195
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 347 bits (854), Expect = 6e-96
Identities = 157/195 (80%), Positives = 176/195 (90%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI +DSVQ+DI++ KI D+IKFDSGNL
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CMITGGRNLGRVGT+
Sbjct: 181 CMITGGRNLGRVGTV 195
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 347 bits (854), Expect = 6e-96
Identities = 157/195 (80%), Positives = 176/195 (90%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI +DSVQ+DI++ KI D+IKFDSGNL
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CMITGGRNLGRVGT+
Sbjct: 181 CMITGGRNLGRVGTV 195
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 342 bits (840), Expect = 3e-94
Identities = 155/195 (79%), Positives = 174/195 (89%)
Frame = +2
Query: 41 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 220
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60
Query: 221 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 400
V KIV QRL+KV GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 401 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVSDSVQLDISTNKIMDFIKFDSGNL 580
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI +DSVQ+DI++ KI D+IKFDSGNL
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 581 CMITGGRNLGRVGTI 625
CMITGGRNLGRVGT+
Sbjct: 181 CMITGGRNLGRVGTV 195
>AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,
isoform C protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.97
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 523 ARHLHQQDHGLHQVRLRQPLHDHRRQESGSRRHH 624
+RH HQQD HQ +H H GS+ HH
Sbjct: 919 SRHPHQQDQHQHQ---HLHMHHHHHHHHGSQHHH 949
>Y07662-1|CAA68943.1| 949|Drosophila melanogaster GATA factor
protein.
Length = 949
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 508 ERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGSRRHH 624
E+L +H HQQ HQ + +Q H ++Q+ + HH
Sbjct: 90 EQLHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHH 128
>AY069823-1|AAL39968.1| 950|Drosophila melanogaster SD07261p
protein.
Length = 950
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 508 ERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGSRRHH 624
E+L +H HQQ HQ + +Q H ++Q+ + HH
Sbjct: 90 EQLHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHH 128
>AE014297-2131|AAF55261.2| 1264|Drosophila melanogaster CG3992-PA,
isoform A protein.
Length = 1264
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 508 ERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGSRRHH 624
E+L +H HQQ HQ + +Q H ++Q+ + HH
Sbjct: 404 EQLHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHH 442
>AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB,
isoform B protein.
Length = 1249
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 508 ERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGSRRHH 624
E+L +H HQQ HQ + +Q H ++Q+ + HH
Sbjct: 404 EQLHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHH 442
>AE014297-4823|AAF57207.1| 1844|Drosophila melanogaster CG1976-PA
protein.
Length = 1844
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +1
Query: 427 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQES 606
R P A PG A P P PA+Q +G +H Q H +Q + H + R +S
Sbjct: 13 RSVPDVTASPGRA----PPGPLPANQMPAMGNQQHHGNQQHHGNQQQHHGNQHSNHRGQS 68
Query: 607 GS 612
GS
Sbjct: 69 GS 70
>AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone receptor
4 protein.
Length = 1518
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = +1
Query: 496 AHQGERLGAARHLHQQD-----HGLHQVR-LRQPLHDHRRQESGSRRHH 624
A Q ++ AA+ HQQ H HQ + L PLH H Q G + HH
Sbjct: 1028 AQQQQQQAAAQQQHQQQQQHQQHQQHQQQQLHSPLHHHHHQ--GHQSHH 1074
>AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p
protein.
Length = 707
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -2
Query: 415 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 236
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 328 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 387
Query: 235 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 110
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 388 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 429
>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
protein.
Length = 1464
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = +1
Query: 496 AHQGERLGAARHLHQQD-----HGLHQVR-LRQPLHDHRRQESGSRRHH 624
A Q ++ AA+ HQQ H HQ + L PLH H Q G + HH
Sbjct: 973 AQQQQQQAAAQQQHQQQQQHQQHQQHQQQQLHSPLHHHHHQ--GHQSHH 1019
>AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC
protein.
Length = 1518
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = +1
Query: 496 AHQGERLGAARHLHQQD-----HGLHQVR-LRQPLHDHRRQESGSRRHH 624
A Q ++ AA+ HQQ H HQ + L PLH H Q G + HH
Sbjct: 1028 AQQQQQQAAAQQQHQQQQQHQQHQQHQQQQLHSPLHHHHHQ--GHQSHH 1074
>AE014296-611|AAS64955.1| 958|Drosophila melanogaster CG11505-PC,
isoform C protein.
Length = 958
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/73 (27%), Positives = 28/73 (38%)
Frame = +1
Query: 406 AVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLH 585
AV A Q VP ++ P HQ + L HQQ Q ++Q LH
Sbjct: 69 AVAPVATASAAQAAVVPAQQQQQAHP-----HQAQILAHTHVAHQQQQQQQQQTIQQHLH 123
Query: 586 DHRRQESGSRRHH 624
++Q+S H
Sbjct: 124 QQQQQQSPHPAQH 136
>AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA,
isoform A protein.
Length = 1521
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/73 (27%), Positives = 28/73 (38%)
Frame = +1
Query: 406 AVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLH 585
AV A Q VP ++ P HQ + L HQQ Q ++Q LH
Sbjct: 69 AVAPVATASAAQAAVVPAQQQQQAHP-----HQAQILAHTHVAHQQQQQQQQQTIQQHLH 123
Query: 586 DHRRQESGSRRHH 624
++Q+S H
Sbjct: 124 QQQQQQSPHPAQH 136
>AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB,
isoform B protein.
Length = 1531
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/73 (27%), Positives = 28/73 (38%)
Frame = +1
Query: 406 AVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLH 585
AV A Q VP ++ P HQ + L HQQ Q ++Q LH
Sbjct: 79 AVAPVATASAAQAAVVPAQQQQQAHP-----HQAQILAHTHVAHQQQQQQQQQTIQQHLH 133
Query: 586 DHRRQESGSRRHH 624
++Q+S H
Sbjct: 134 QQQQQQSPHPAQH 146
>AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-PB,
isoform B protein.
Length = 714
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -2
Query: 415 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 236
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 335 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 394
Query: 235 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 110
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 395 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 436
>AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA
protein.
Length = 2958
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +1
Query: 481 PVPGPAHQGERLGAARHL-HQQDHGLHQVRLRQPLHDHRRQESGSRRH 621
P P P HQ H H HG H P H H +GS H
Sbjct: 1345 PPPCPVHQSAHTAFPYHTHHHHPHGHHPYPHPHP-HHHPHHHAGSSAH 1391
>BT025212-1|ABF17903.1| 1189|Drosophila melanogaster FI01101p
protein.
Length = 1189
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 508 ERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGSRRHH 624
++LG + L QQ Q +L+Q H H+ Q + HH
Sbjct: 534 KKLGMTQQLQQQQQ--QQQQLQQQQHQHQHQVQQQQHHH 570
>BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p
protein.
Length = 1057
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +1
Query: 433 RPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGS 612
+PQ + P ++ H Q + H HQQ H Q + +Q H++Q+
Sbjct: 54 QPQGQG-PSPQQQQHQQQQQQQQQQHQQNMHHHQHQQQHMQQQQQQQQHQQQHQQQQHQQ 112
Query: 613 RRHH 624
++ H
Sbjct: 113 QQQH 116
>AF145661-1|AAD38636.1| 1189|Drosophila melanogaster BcDNA.GH10646
protein.
Length = 1189
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 508 ERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGSRRHH 624
++LG + L QQ Q +L+Q H H+ Q + HH
Sbjct: 534 KKLGMTQQLQQQQQ--QQQQLQQQQHQHQHQVQQQQHHH 570
>AE014298-1293|AAF46457.1| 1189|Drosophila melanogaster CG12218-PA
protein.
Length = 1189
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 508 ERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGSRRHH 624
++LG + L QQ Q +L+Q H H+ Q + HH
Sbjct: 534 KKLGMTQQLQQQQQ--QQQQLQQQQHQHQHQVQQQQHHH 570
>AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA
protein.
Length = 1039
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +1
Query: 433 RPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGS 612
+PQ + P ++ H Q + H HQQ H Q + +Q H++Q+
Sbjct: 54 QPQGQG-PSPQQQQHQQQQQQQQQQHQQNMHHHQHQQQHMQQQQQQQQHQQQHQQQQHQQ 112
Query: 613 RRHH 624
++ H
Sbjct: 113 QQQH 116
>AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC,
isoform C protein.
Length = 945
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 412 QGAARRDRPQERAVPGDARRAHAPVPGPAH 501
+G+ RR Q+R PG P P PAH
Sbjct: 581 RGSPRRKDAQDRTTPGTEPHTTNPNPAPAH 610
>AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB,
isoform B protein.
Length = 737
Score = 28.3 bits (60), Expect = 9.0
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 86 KAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLK---YALTGNEVLKIVKQRLIKV 256
++W L + AP P G + E +R ++ ++TG E++++VKQ KV
Sbjct: 4 RSWNLLQYATEKAPIPLDG-YTAEEAAEFKDSIRQKIVDDLKSMTGEELIELVKQNAAKV 62
Query: 257 -DGKVRTDPTYP 289
+ KV PT P
Sbjct: 63 EEEKVEIPPTEP 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,676,030
Number of Sequences: 53049
Number of extensions: 650623
Number of successful extensions: 2656
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2634
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -