Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C11
         (108 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC082974-1|AAH82974.1| 1151|Homo sapiens PLEKHG4 protein protein.      29   3.6  
BC063501-1|AAH63501.1| 1191|Homo sapiens PLEKHG4 protein protein.      29   3.6  
BC054486-1|AAH54486.1| 1110|Homo sapiens PLEKHG4 protein protein.      29   3.6  
AK024475-1|BAB15765.1| 1194|Homo sapiens FLJ00068 protein protein.     29   3.6  
AB197663-1|BAE07054.1| 1191|Homo sapiens puratrophin-1 protein.        29   3.6  

>BC082974-1|AAH82974.1| 1151|Homo sapiens PLEKHG4 protein protein.
          Length = 1151

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +1

Query: 22  GGPASDLASTRKILNLIHYKIKH 90
           GGP  +L++ R+  +L+H++++H
Sbjct: 842 GGPTQELSALREAQSLVHFQLRH 864


>BC063501-1|AAH63501.1| 1191|Homo sapiens PLEKHG4 protein protein.
          Length = 1191

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +1

Query: 22  GGPASDLASTRKILNLIHYKIKH 90
           GGP  +L++ R+  +L+H++++H
Sbjct: 882 GGPTQELSALREAQSLVHFQLRH 904


>BC054486-1|AAH54486.1| 1110|Homo sapiens PLEKHG4 protein protein.
          Length = 1110

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +1

Query: 22  GGPASDLASTRKILNLIHYKIKH 90
           GGP  +L++ R+  +L+H++++H
Sbjct: 801 GGPTQELSALREAQSLVHFQLRH 823


>AK024475-1|BAB15765.1| 1194|Homo sapiens FLJ00068 protein protein.
          Length = 1194

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +1

Query: 22  GGPASDLASTRKILNLIHYKIKH 90
           GGP  +L++ R+  +L+H++++H
Sbjct: 885 GGPTQELSALREAQSLVHFQLRH 907


>AB197663-1|BAE07054.1| 1191|Homo sapiens puratrophin-1 protein.
          Length = 1191

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +1

Query: 22  GGPASDLASTRKILNLIHYKIKH 90
           GGP  +L++ R+  +L+H++++H
Sbjct: 882 GGPTQELSALREAQSLVHFQLRH 904


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.313    0.131    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,816,236
Number of Sequences: 237096
Number of extensions: 106500
Number of successful extensions: 220
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 76,859,062
effective HSP length: 16
effective length of database: 73,065,526
effective search space used: 1388244994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)