Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C07
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.27 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.9  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.27
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 206 YSCDPTIRR-FHSVLPVQRVYQACHNNGLDHTARGQQGCILSGNHRKPFFLTNLSN 42
           Y C+ TI   FHSVLP++R + +      D+  +    C + G H   FFL    +
Sbjct: 155 YVCNTTIFLIFHSVLPIKRFFTSL-GIAFDNIMKNLI-CEIDGRHE--FFLAEFKS 206


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 177 SFSFTCPKGVSGL 139
           S++ TCP G SG+
Sbjct: 6   SYTCTCPLGFSGI 18


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 256 PPPPGSAASAHNS*RSLTPATQP 188
           PP P SAA+  +S    +PA  P
Sbjct: 12  PPAPQSAATPISSSGMTSPAAAP 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,460
Number of Sequences: 336
Number of extensions: 2829
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)