Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C04
         (300 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    24   0.40 
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    24   0.40 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   2.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   3.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   3.8  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    20   5.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    20   5.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   8.7  

>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 0.40
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 69  YQTQYTHFLE 40
           YQTQY H+LE
Sbjct: 111 YQTQYAHYLE 120


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 0.40
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 69  YQTQYTHFLE 40
           YQTQY H+LE
Sbjct: 111 YQTQYAHYLE 120


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 283 RQPGMVYTSLVYHELLRKF 227
           R+P  +Y+SL   +L R+F
Sbjct: 122 RKPRTIYSSLQLQQLNRRF 140


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 148 HQRIAPVSLHLHSPPLVQPCKLPPC 74
           H  + P ++H+   P + P   P C
Sbjct: 368 HHDMLPETMHMGMGPSLTPLASPGC 392


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 148 HQRIAPVSLHLHSPPLVQPCKLPPC 74
           H  + P ++H+   P + P   P C
Sbjct: 368 HHDMLPETMHMGMGPSLTPLASPGC 392


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 69  YQTQYTHFLE 40
           Y+++Y HFLE
Sbjct: 110 YKSRYNHFLE 119


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 13/54 (24%), Positives = 22/54 (40%)
 Frame = +1

Query: 121 EGKLELFSGVVIEKDASGENKLNVKFEPGELREAARTFEEARGKLKTYTPFLAG 282
           E +L + S +    +  G  +L+    P  +  A  +    R  +  Y P LAG
Sbjct: 381 EVRLNIISNLDCVNEVIGIQQLSQSLLPAIVELAEDSKWRVRSAIIEYMPLLAG 434


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = -3

Query: 100 VQPCKLPPCIIPNTIHAFSRNLL*SYPDCTL 8
           V  CK  PC    T H    +   S P  TL
Sbjct: 223 VDDCKPNPCQNGGTCHDLVNSFSCSCPSGTL 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.312    0.135    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,257
Number of Sequences: 336
Number of extensions: 1158
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.0 bits)