Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_C03
(507 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4QQF2 Cluster: Gag-pol polyprotein; n=2; Schistosoma|R... 56 6e-07
UniRef50_Q4QQF1 Cluster: Gag-pol polyprotein; n=1; Schistosoma m... 56 6e-07
UniRef50_Q4QQF4 Cluster: Gag-pol polyprotein; n=8; Bilateria|Rep... 45 9e-04
UniRef50_UPI0000F1FB24 Cluster: PREDICTED: similar to novel tran... 41 0.019
UniRef50_A3IKX0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.032
UniRef50_Q5BSZ6 Cluster: SJCHGC03033 protein; n=1; Schistosoma j... 40 0.032
UniRef50_A0NAK5 Cluster: ENSANGP00000029918; n=1; Anopheles gamb... 39 0.075
UniRef50_Q5DB15 Cluster: SJCHGC06426 protein; n=1; Schistosoma j... 38 0.099
UniRef50_Q4E164 Cluster: Protein kinase, putative; n=2; Trypanos... 38 0.17
UniRef50_UPI0000E8076B Cluster: PREDICTED: similar to gag/env fu... 37 0.23
UniRef50_Q7Q5H9 Cluster: ENSANGP00000021033; n=1; Anopheles gamb... 37 0.23
UniRef50_UPI00015B455D Cluster: PREDICTED: similar to polyprotei... 36 0.70
UniRef50_UPI0000076943 Cluster: F28C10.2; n=1; Caenorhabditis el... 35 1.2
UniRef50_Q09575 Cluster: Uncharacterized protein K02A2.6; n=3; C... 35 1.2
UniRef50_Q16VW6 Cluster: Phd finger domain; n=1; Aedes aegypti|R... 34 1.6
UniRef50_Q9RYV0 Cluster: Oligoendopeptidase F, putative; n=2; De... 33 3.7
UniRef50_Q803I9 Cluster: Nuclear VCP-like; n=4; Deuterostomia|Re... 33 4.9
UniRef50_Q0B4D0 Cluster: Adhesin HecA family; n=5; cellular orga... 33 4.9
UniRef50_UPI0000161E59 Cluster: hypothetical protein Esvgp221; n... 32 6.5
UniRef50_Q3LBV1 Cluster: Putative transposase; n=1; Candidatus P... 32 6.5
UniRef50_Q02Z35 Cluster: Putative uncharacterized protein; n=1; ... 32 6.5
UniRef50_A5FXG6 Cluster: Putative uncharacterized protein precur... 32 6.5
UniRef50_Q07N26 Cluster: Putative uncharacterized protein precur... 32 8.6
UniRef50_A0VAJ0 Cluster: Conserved repeat domain precursor; n=1;... 32 8.6
UniRef50_Q945Q7 Cluster: Dehydrin-like protein; n=1; Medicago sa... 32 8.6
UniRef50_Q4P0N2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_Q2HBB2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_A6YIF5 Cluster: Intein-containing PRP8 protein; n=2; Bo... 32 8.6
>UniRef50_Q4QQF2 Cluster: Gag-pol polyprotein; n=2; Schistosoma|Rep:
Gag-pol polyprotein - Schistosoma mansoni (Blood fluke)
Length = 753
Score = 55.6 bits (128), Expect = 6e-07
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 10 FGRHLRTRLDLVLPSNLENNEAASHKELC-KSRQFKIGEKVWARWFTARKASWMKGIITN 186
FGR +RT D++ P + + ++K C K R+FK+G+ V+AR F K W+ G I
Sbjct: 597 FGRPIRTFFDVLNPKDRISGLQKNNKGNCLKIREFKVGDSVYARDFRPGKPKWIFGFIKK 656
Query: 187 VTGNRMFHIKFENCVNPCIRHLDQIR 264
G ++ + EN + IRH++Q+R
Sbjct: 657 RRGTVLYEVMVENTL--IIRHVNQLR 680
>UniRef50_Q4QQF1 Cluster: Gag-pol polyprotein; n=1; Schistosoma
mansoni|Rep: Gag-pol polyprotein - Schistosoma mansoni
(Blood fluke)
Length = 782
Score = 55.6 bits (128), Expect = 6e-07
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 10 FGRHLRTRLDLVLPSNLENNEAASHKELC-KSRQFKIGEKVWARWFTARKASWMKGIITN 186
FGR +RT D++ P + + ++K C K R+FK+G+ V+AR F K W+ G I
Sbjct: 626 FGRPIRTFFDVLNPKDRISGLQKNNKGNCLKIREFKVGDSVYARDFRPGKPKWIFGFIKK 685
Query: 187 VTGNRMFHIKFENCVNPCIRHLDQIR 264
G ++ + EN + IRH++Q+R
Sbjct: 686 RRGTVLYEVMVENTL--IIRHVNQLR 709
>UniRef50_Q4QQF4 Cluster: Gag-pol polyprotein; n=8; Bilateria|Rep:
Gag-pol polyprotein - Schistosoma mansoni (Blood fluke)
Length = 1357
Score = 45.2 bits (102), Expect = 9e-04
Identities = 28/86 (32%), Positives = 44/86 (51%)
Frame = +1
Query: 10 FGRHLRTRLDLVLPSNLENNEAASHKELCKSRQFKIGEKVWARWFTARKASWMKGIITNV 189
FGR +RT +LP + + +R FK+GE+V + + K W GII
Sbjct: 1216 FGRKIRTIFSSMLPPRKTRKPTNGNHMV--TRSFKVGERVLVKSYQGGKR-WEPGIIERR 1272
Query: 190 TGNRMFHIKFENCVNPCIRHLDQIRK 267
G+ ++ I+ V CIRH++QIR+
Sbjct: 1273 IGSVLYLIRRN--VGTCIRHINQIRR 1296
>UniRef50_UPI0000F1FB24 Cluster: PREDICTED: similar to novel
transposon; n=4; Danio rerio|Rep: PREDICTED: similar to
novel transposon - Danio rerio
Length = 1299
Score = 40.7 bits (91), Expect = 0.019
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Frame = +1
Query: 16 RHLRTRLDLVLPS------NLENNEAASHKELCKSRQFKIGEKVWARWFTARKASWMKGI 177
RH+RTRLD V P + + H + R F + V+ R T + W+ G+
Sbjct: 1143 RHVRTRLDFVHPDVTVAVRRKQYLQKFHHDKRSVERSFSEKDAVYLRNTTGKGNKWVPGV 1202
Query: 178 ITNVTGNRMFHIKFENCVNPCIRHLDQIRKYTESKTDINVSDVDFAGS-ASVR 333
I TG ++++ + RH DQ+R + D G+ SVR
Sbjct: 1203 IVKQTGPVSYNVQGQETDGTFRRHCDQLRPRVVVDDPVEQMDCSETGTETSVR 1255
>UniRef50_A3IKX0 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 603
Score = 39.9 bits (89), Expect = 0.032
Identities = 21/47 (44%), Positives = 21/47 (44%)
Frame = -2
Query: 506 GNCNDPVGNGTDSTVLGVDIGAGSSTPDGGLNEGGGDSELSLDVDCT 366
GN N GNG ST G G G ST GG GGG VD T
Sbjct: 352 GNSNGNNGNGGGSTGGGGSTGGGGSTGGGGSTSGGGSGSCGTQVDAT 398
>UniRef50_Q5BSZ6 Cluster: SJCHGC03033 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03033 protein - Schistosoma
japonicum (Blood fluke)
Length = 179
Score = 39.9 bits (89), Expect = 0.032
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 10 FGRHLRTRLDLVLPSN----LENNEAASHKELCKSRQFKIGEKVWARWFTARKASWMKGI 177
FGRH+RT D+V P + NN +K ++R F +G+ V A + + W+ G
Sbjct: 101 FGRHMRTFFDIVHPRDKVKVTSNNGGNDYK---RTRDFNVGDSVHACDYRPNRPKWINGT 157
Query: 178 ITNVTGNRMFHIKFENCVNPCIRH 249
I G ++ ++ + V IRH
Sbjct: 158 IVARKGKVVYEVRVGDMV--IIRH 179
>UniRef50_A0NAK5 Cluster: ENSANGP00000029918; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000029918 - Anopheles gambiae
str. PEST
Length = 81
Score = 38.7 bits (86), Expect = 0.075
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 118 GEKVWARWFTARKASWMKGIITNVTGNRMFHIKFENCVNPCIR-HLDQIRK 267
G++++A+++ K WM G+I+ GN M+ I+ N N R H++Q+RK
Sbjct: 4 GDRIFAKFYANNKYRWMPGVISKRIGNVMYEIRTGN--NQLYRCHINQLRK 52
>UniRef50_Q5DB15 Cluster: SJCHGC06426 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06426 protein - Schistosoma
japonicum (Blood fluke)
Length = 164
Score = 38.3 bits (85), Expect = 0.099
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +1
Query: 10 FGRHLRTRLDLVLPSNLENNEAASHKELCKSRQFKIGEKVWARWFTARKASWMKGIITNV 189
FGR +RT D +LP L ++ S E +S +G+KV + + W II
Sbjct: 2 FGRRVRTIFDAMLPRKL--TDSYSRNETIRS--LNVGDKVLVKSHLGPR-RWEPAIIEQR 56
Query: 190 TGNRMFHIKFENCVNPCIRHLDQIRK 267
GN ++ ++ IRH++QIR+
Sbjct: 57 IGNVLYRVR--GAFGTWIRHINQIRR 80
>UniRef50_Q4E164 Cluster: Protein kinase, putative; n=2; Trypanosoma
cruzi|Rep: Protein kinase, putative - Trypanosoma cruzi
Length = 971
Score = 37.5 bits (83), Expect = 0.17
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = -2
Query: 458 GVDIGAGSSTPDGGLNEGGGDSEL-SLDVDCTGRTHLVEPGRSLTDALPAKST 303
G+DIGA + T LN+ G SE+ S+ VD T T + PGR +A P KST
Sbjct: 69 GLDIGADNGTVSAILNQARGCSEVRSVAVDTTPTTRALFPGRD--EARPIKST 119
>UniRef50_UPI0000E8076B Cluster: PREDICTED: similar to gag/env
fusion protein; n=1; Gallus gallus|Rep: PREDICTED:
similar to gag/env fusion protein - Gallus gallus
Length = 572
Score = 37.1 bits (82), Expect = 0.23
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -2
Query: 455 VDIGAGSSTPDGGLNEGGGDSELSLDVDCTGRTHLVEPGRSLTDALPAKSTSLT 294
+D+G G TPD G ++GG + V C GR + EP ++ + PA+ T+L+
Sbjct: 99 LDLGGGGETPDRGGSDGGSGA-----VSCRGREEM-EPPMTVVEVAPAEPTALS 146
>UniRef50_Q7Q5H9 Cluster: ENSANGP00000021033; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021033 - Anopheles gambiae
str. PEST
Length = 1117
Score = 37.1 bits (82), Expect = 0.23
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 109 FKIGEKVWARWFTARKASWMKGIITNVTGNRMFHIKFENCVNPCIR--HLDQIRKYTESK 282
+ +GEKV+ARW +RK K I +V N+M+ + F++ + H+ +I++ ++K
Sbjct: 310 YSVGEKVFARWSDSRK---FKATIKSVLENQMYEVVFDDGFAKICKSTHISRIKRSEDAK 366
Query: 283 TD 288
D
Sbjct: 367 GD 368
>UniRef50_UPI00015B455D Cluster: PREDICTED: similar to polyprotein;
n=5; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1427
Score = 35.5 bits (78), Expect = 0.70
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 13 GRHLRTRLDLVLPSNLENNEAASHK-ELCKS-RQFKIGEKVWARWFTARKASWMKGIITN 186
GR++RTRLDLV P + + + + EL + R F+ + V+ R W+ G I
Sbjct: 1253 GRNIRTRLDLVRPDSTQTRISQKQQAELNPTFRTFQPMQTVYFLSGNPRMDKWIPGTIIT 1312
Query: 187 VTGNRMFHIKFENCVNPCIRHLDQIRKYTESK 282
G+ H + + RH+DQI + + K
Sbjct: 1313 RLGD--LHYEIDYLGKSFKRHVDQIVLFEDHK 1342
>UniRef50_UPI0000076943 Cluster: F28C10.2; n=1; Caenorhabditis
elegans|Rep: F28C10.2 - Caenorhabditis elegans
Length = 237
Score = 34.7 bits (76), Expect = 1.2
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Frame = +1
Query: 13 GRHLRTRLDLVLP----------SNLENNEAASHKELCKSRQFKIGEKVWARWFTARKAS 162
GR LRTR L++P S L + K+R F EKV+A+ + S
Sbjct: 27 GRRLRTRTSLMMPRKDHSEDSTASTLAMKDQFDKHNRAKARYFHEDEKVFAKVYERNSWS 86
Query: 163 WMKGIITNVTGNRMFHIKFENCVNPCIRHLDQIRKYTESKTDINVS 300
W G + N G ++ ++ + H +Q++ + K + V+
Sbjct: 87 WKPGKVANKQG-KVVYVNILDDGRERAVHANQLKPRVDEKETVRVN 131
>UniRef50_Q09575 Cluster: Uncharacterized protein K02A2.6; n=3;
Caenorhabditis elegans|Rep: Uncharacterized protein
K02A2.6 - Caenorhabditis elegans
Length = 1268
Score = 34.7 bits (76), Expect = 1.2
Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Frame = +1
Query: 10 FGRHLRTRLDLVLPSNLE---------NNEAASHKEL---CKSRQFKIGEKVWARWFTAR 153
FGR +RT + L++P++ H EL +++ F++ +KV+ +
Sbjct: 994 FGRKIRTTMSLLMPTDRVLKVPKLTQYQQNMKHHYELRNGARAKAFQVNQKVYVQVHHGN 1053
Query: 154 KASWMKGIITNVTGNRMFHIKFENCVNPCIRHLDQIR-KYTE-SKTDIN 294
K+ W G+I G ++ ++ + + H++QIR +Y + S++ +N
Sbjct: 1054 KSQWKHGVIRRKFGGVLYEVQVGDRMQK--SHVNQIRTRYGDYSRSSVN 1100
>UniRef50_Q16VW6 Cluster: Phd finger domain; n=1; Aedes aegypti|Rep:
Phd finger domain - Aedes aegypti (Yellowfever mosquito)
Length = 1048
Score = 34.3 bits (75), Expect = 1.6
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 106 QFKIGEKVWARWFTARKASWMKGIITNVTGNRMFHIKFEN-CVNPC-IRHLDQIRKY 270
+F IGEK +ARW +RK + I V N M+ + F++ V C + H+ +++++
Sbjct: 258 RFSIGEKCFARWSDSRK---FRATIQAVLENDMYEVLFDDGFVKVCKVNHISKVKRH 311
>UniRef50_Q9RYV0 Cluster: Oligoendopeptidase F, putative; n=2;
Deinococcus|Rep: Oligoendopeptidase F, putative -
Deinococcus radiodurans
Length = 611
Score = 33.1 bits (72), Expect = 3.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 215 LI*NILFPVTFVMIPFIQLAFLAVNHLAHTFS 120
L+ N P+ FV IP + + FL ++HL+H FS
Sbjct: 424 LVWNRWSPIEFVEIPSMAMEFLTLDHLSHVFS 455
>UniRef50_Q803I9 Cluster: Nuclear VCP-like; n=4; Deuterostomia|Rep:
Nuclear VCP-like - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 796
Score = 32.7 bits (71), Expect = 4.9
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 190 TGNRMFHIKFENCVNPCIRHLDQIRKYTESKTDINVSDVDF 312
TG + + E CVN HLD + +TES DI VS V F
Sbjct: 728 TGADLSALVREACVNALRVHLDPAQTHTESAKDIRVSRVHF 768
>UniRef50_Q0B4D0 Cluster: Adhesin HecA family; n=5; cellular
organisms|Rep: Adhesin HecA family - Burkholderia cepacia
(strain ATCC 53795 / AMMD)
Length = 3929
Score = 32.7 bits (71), Expect = 4.9
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -2
Query: 494 DPVGNGTDSTVLGVDIGAGSSTPDGGLNEGGGDSELSLDVDCTGRTHLVEPGRSLTDALP 315
D NGT T G+ IG G +T GG + GD L+ T ++ G +L+ +
Sbjct: 912 DVTVNGTLRTASGLAIGGGRNTSIGGTVQSNGDVALTNAAGSLASTGNIQSGGNLS-VIA 970
Query: 314 AKSTSLTLMS 285
A+S L S
Sbjct: 971 AQSVDLGTQS 980
>UniRef50_UPI0000161E59 Cluster: hypothetical protein Esvgp221; n=1;
Ectocarpus siliculosus virus 1|Rep: hypothetical protein
Esvgp221 - Ectocarpus siliculosus virus 1
Length = 361
Score = 32.3 bits (70), Expect = 6.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 506 GNCNDPVGNGTDSTVLGVDIGAGSSTPDGGLNEGGGD 396
G+ D +G D +V + IG G+ + G+NEG GD
Sbjct: 13 GSDGDEGSDGLDGSVEAMAIGEGADSDGDGINEGSGD 49
>UniRef50_Q3LBV1 Cluster: Putative transposase; n=1; Candidatus
Phytoplasma solani|Rep: Putative transposase -
Candidatus Phytoplasma solani
Length = 148
Score = 32.3 bits (70), Expect = 6.5
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 232 NPCIRHLDQIRKYTESKTDINVSDVDFAGSASVRDRPGSTRCV 360
NPC+ H D+ YT K N+ + + S S + P C+
Sbjct: 54 NPCVIHCDRRNVYTSKKYKANLKENNLIASYSAKGMPTDNACM 96
>UniRef50_Q02Z35 Cluster: Putative uncharacterized protein; n=1;
Lactococcus lactis subsp. cremoris SK11|Rep: Putative
uncharacterized protein - Lactococcus lactis subsp.
cremoris (strain SK11)
Length = 403
Score = 32.3 bits (70), Expect = 6.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 476 TDSTVLGVDIGAGSSTPDGGLNEGGGDSELSLDVDCTGRTHLVEP 342
T ST G G++TPDG N G EL + + TG T+ P
Sbjct: 321 TGSTSNPSGSGIGANTPDGNYNNGSQTGELEVPGEPTGPTNPTSP 365
>UniRef50_A5FXG6 Cluster: Putative uncharacterized protein
precursor; n=1; Acidiphilium cryptum JF-5|Rep: Putative
uncharacterized protein precursor - Acidiphilium cryptum
(strain JF-5)
Length = 210
Score = 32.3 bits (70), Expect = 6.5
Identities = 20/56 (35%), Positives = 23/56 (41%)
Frame = -2
Query: 506 GNCNDPVGNGTDSTVLGVDIGAGSSTPDGGLNEGGGDSELSLDVDCTGRTHLVEPG 339
G+ G GTD+ G G +TPDGGL S TG H V PG
Sbjct: 146 GDTGTDTGGGTDT-----GSGTGGTTPDGGLTAPPDGSTSGPIGGATGGEHFVHPG 196
>UniRef50_Q07N26 Cluster: Putative uncharacterized protein precursor;
n=1; Rhodopseudomonas palustris BisA53|Rep: Putative
uncharacterized protein precursor - Rhodopseudomonas
palustris (strain BisA53)
Length = 3902
Score = 31.9 bits (69), Expect = 8.6
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -2
Query: 455 VDIGAGSSTPDGGLNEGGGDSELSLDVDCTGRTHLVEPGRSLTDALPAKSTSLTLMSVL 279
+D+ AG + G G GD+E++ TGRT +V S T A P + + TL +VL
Sbjct: 3058 LDVSAGGTIYGGQYYIGRGDAEIAAGAITTGRTFVVTKLDSYTPA-PGIARNYTLGTVL 3115
>UniRef50_A0VAJ0 Cluster: Conserved repeat domain precursor; n=1;
Delftia acidovorans SPH-1|Rep: Conserved repeat domain
precursor - Delftia acidovorans SPH-1
Length = 1202
Score = 31.9 bits (69), Expect = 8.6
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = -2
Query: 455 VDIGAGSSTPDGGLNEGGGDSELSLDVDCTGRTHLVEPGRSLTDALPA 312
VD+G G P G L++G S +L V GR G S+TD LPA
Sbjct: 1041 VDLGIGKQGPAGPLDDGDTAS-YTLTVTNYGRDPQSPAGGSVTDVLPA 1087
>UniRef50_Q945Q7 Cluster: Dehydrin-like protein; n=1; Medicago
sativa|Rep: Dehydrin-like protein - Medicago sativa
(Alfalfa)
Length = 330
Score = 31.9 bits (69), Expect = 8.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 506 GNCNDPVGNGTDSTVLGVDIGAGSSTPDGGLNEGGGDSELSLDVDCTG 363
G G+G GVD G G+ T GG + GG D+D TG
Sbjct: 36 GGMTGATGHGHHQQHHGVDTGYGAHTGSGGAHTGGVGGYGGTDIDGTG 83
>UniRef50_Q4P0N2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 540
Score = 31.9 bits (69), Expect = 8.6
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 225 IFKFNMKHSIPCNVRNDSFHPTSLSSRKPSCPYFFSYFKLSRLTE 91
I F S P N ++ + PTS +S+ PS SY + S LTE
Sbjct: 189 ILNFVRSKSFPKNGQSRALFPTSHTSQLPSAKSIHSYLRSSNLTE 233
>UniRef50_Q2HBB2 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 393
Score = 31.9 bits (69), Expect = 8.6
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 485 GNGTDSTVLGVDIGAGSSTPDGGLNEGGGDS-ELSLDVDCTGRTHLVEPGRSL-TDALPA 312
G T ++ G G+GS GGL GGGDS +S +DCT R V G + L
Sbjct: 162 GGATSASGSGSGSGSGSGG-GGGLGLGGGDSLVISGGLDCTVRVWDVRAGGARPVQVLSE 220
Query: 311 KSTSLTLMSV 282
S+T ++V
Sbjct: 221 AKDSVTALAV 230
>UniRef50_A6YIF5 Cluster: Intein-containing PRP8 protein; n=2;
Botryotinia fuckeliana|Rep: Intein-containing PRP8
protein - Botrytis cinerea (Noble rot fungus)
(Botryotinia fuckeliana)
Length = 838
Score = 31.9 bits (69), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 425 DGGLNEGGGDSELSLDVDCTGRTHLVEPGRSLTDALPAKSTSLTLMSVLDSV 270
D G N G GDS LS D R H ++ GR L + L ++D+V
Sbjct: 598 DEGSNVGAGDSNLSDDSVSQRRIHRLQSGRRAYGDLQPEEQDQLLSQIIDTV 649
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,085,779
Number of Sequences: 1657284
Number of extensions: 9071961
Number of successful extensions: 33375
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33241
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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