Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C03
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   2.7  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   2.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   6.3  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 135 CPYFFSYFKLSRLTEFFMRCSFIIF 61
           C Y+F Y  +  L  ++   +FIIF
Sbjct: 99  CTYYFYYAFIILLCVYYFYYAFIIF 123



 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 135 CPYFFSYFKLSRLTEFFMRCSFIIF 61
           C Y+F       L  ++  C+FIIF
Sbjct: 132 CIYYFVVPLFFLLCIYYFYCAFIIF 156


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 367 PVAHISSSRAGPSPTH 320
           P A+ SSS +G SP H
Sbjct: 32  PAAYSSSSPSGSSPQH 47


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 367 PVAHISSSRAGPSPTH 320
           P A+ SSS +G SP H
Sbjct: 32  PAAYSSSSPSGSSPQH 47


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 180 NDSFHPTSLSSRKPSCPYFFSY 115
           N  + P SLS  +P  PY  +Y
Sbjct: 21  NARYLPPSLSDTRPMLPYPQNY 42


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/29 (20%), Positives = 16/29 (55%)
 Frame = -3

Query: 394 QSSALMLIVPVAHISSSRAGPSPTHFQQN 308
           Q  +  +++P    S + + P+P+H  ++
Sbjct: 183 QYQSYQILLPTPTCSEASSSPTPSHSSES 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,564
Number of Sequences: 336
Number of extensions: 2376
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)