Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_C03
(507 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35141-1|CAA84513.1| 467|Homo sapiens PAX7 paired box containin... 30 4.0
X96744-2|CAA65522.1| 520|Homo sapiens PAX7 protein. 30 4.0
X96744-1|CAA65521.1| 518|Homo sapiens PAX7 protein. 30 4.0
X96743-1|CAA65520.1| 520|Homo sapiens paired box containing tra... 30 4.0
DQ322591-1|ABC48797.1| 505|Homo sapiens PAX7 transcriptional fa... 30 4.0
BC121166-1|AAI21167.1| 518|Homo sapiens paired box 7 protein. 30 4.0
BC121165-1|AAI21166.1| 518|Homo sapiens paired box 7 protein. 30 4.0
AL021528-1|CAA16432.1| 520|Homo sapiens paired box gene 7 protein. 30 4.0
X16841-1|CAA34739.1| 761|Homo sapiens protein ( Human mRNA for ... 30 5.3
U63041-1|AAB04558.1| 848|Homo sapiens neural cell adhesion mole... 30 5.3
S71824-1|AAB31836.1| 848|Homo sapiens N-CAM protein. 30 5.3
M22094-1|AAA59910.1| 165|Homo sapiens NCAM protein. 30 5.3
M22092-1|AAA59911.1| 165|Homo sapiens neural cell adhesion mole... 30 5.3
M17410-1|AAA59913.1| 355|Homo sapiens NCAM protein. 30 5.3
M17409-1|AAA59912.1| 271|Homo sapiens NCAM protein. 30 5.3
BC047244-1|AAH47244.1| 858|Homo sapiens neural cell adhesion mo... 30 5.3
BC014205-1|AAH14205.2| 601|Homo sapiens NCAM1 protein protein. 30 5.3
AB209443-1|BAD92680.1| 807|Homo sapiens Neural cell adhesion mo... 30 5.3
BC015211-1|AAH15211.1| 285|Homo sapiens PHD finger protein 20-l... 29 9.3
>Z35141-1|CAA84513.1| 467|Homo sapiens PAX7 paired box containing
transcription factor protein.
Length = 467
Score = 30.3 bits (65), Expect = 4.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -2
Query: 503 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 345
N +PV NG V+ + +G S+ P D ++ GG DS S+ C+ R ++
Sbjct: 373 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 431
Query: 344 PGRSL 330
PG SL
Sbjct: 432 PGDSL 436
>X96744-2|CAA65522.1| 520|Homo sapiens PAX7 protein.
Length = 520
Score = 30.3 bits (65), Expect = 4.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -2
Query: 503 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 345
N +PV NG V+ + +G S+ P D ++ GG DS S+ C+ R ++
Sbjct: 373 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 431
Query: 344 PGRSL 330
PG SL
Sbjct: 432 PGDSL 436
>X96744-1|CAA65521.1| 518|Homo sapiens PAX7 protein.
Length = 518
Score = 30.3 bits (65), Expect = 4.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -2
Query: 503 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 345
N +PV NG V+ + +G S+ P D ++ GG DS S+ C+ R ++
Sbjct: 371 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 429
Query: 344 PGRSL 330
PG SL
Sbjct: 430 PGDSL 434
>X96743-1|CAA65520.1| 520|Homo sapiens paired box containing
transcription factor protein.
Length = 520
Score = 30.3 bits (65), Expect = 4.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -2
Query: 503 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 345
N +PV NG V+ + +G S+ P D ++ GG DS S+ C+ R ++
Sbjct: 373 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 431
Query: 344 PGRSL 330
PG SL
Sbjct: 432 PGDSL 436
>DQ322591-1|ABC48797.1| 505|Homo sapiens PAX7 transcriptional
factor isoform B protein.
Length = 505
Score = 30.3 bits (65), Expect = 4.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -2
Query: 503 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 345
N +PV NG V+ + +G S+ P D ++ GG DS S+ C+ R ++
Sbjct: 373 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 431
Query: 344 PGRSL 330
PG SL
Sbjct: 432 PGDSL 436
>BC121166-1|AAI21167.1| 518|Homo sapiens paired box 7 protein.
Length = 518
Score = 30.3 bits (65), Expect = 4.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -2
Query: 503 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 345
N +PV NG V+ + +G S+ P D ++ GG DS S+ C+ R ++
Sbjct: 371 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 429
Query: 344 PGRSL 330
PG SL
Sbjct: 430 PGDSL 434
>BC121165-1|AAI21166.1| 518|Homo sapiens paired box 7 protein.
Length = 518
Score = 30.3 bits (65), Expect = 4.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -2
Query: 503 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 345
N +PV NG V+ + +G S+ P D ++ GG DS S+ C+ R ++
Sbjct: 371 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 429
Query: 344 PGRSL 330
PG SL
Sbjct: 430 PGDSL 434
>AL021528-1|CAA16432.1| 520|Homo sapiens paired box gene 7 protein.
Length = 520
Score = 30.3 bits (65), Expect = 4.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -2
Query: 503 NCNDPVGNGTDSTVLGVDIGAGSSTP-----DGGLN--EGGGDSELSLDVDCTGRTHLVE 345
N +PV NG V+ + +G S+ P D ++ GG DS S+ C+ R ++
Sbjct: 373 NHMNPVSNGLSPQVMSI-LGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIK 431
Query: 344 PGRSL 330
PG SL
Sbjct: 432 PGDSL 436
>X16841-1|CAA34739.1| 761|Homo sapiens protein ( Human mRNA for a
nontransmembrane isoform of N-CAM from skeletal muscle.
).
Length = 761
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 IGEKVW-ARWFTARKASWMKGIITNV 189
+GE+VW ++W+ A++AS M+GI+T V
Sbjct: 540 VGEEVWHSKWYDAKEAS-MEGIVTIV 564
>U63041-1|AAB04558.1| 848|Homo sapiens neural cell adhesion
molecule CD56 protein.
Length = 848
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 IGEKVW-ARWFTARKASWMKGIITNV 189
+GE+VW ++W+ A++AS M+GI+T V
Sbjct: 540 VGEEVWHSKWYDAKEAS-MEGIVTIV 564
>S71824-1|AAB31836.1| 848|Homo sapiens N-CAM protein.
Length = 848
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 IGEKVW-ARWFTARKASWMKGIITNV 189
+GE+VW ++W+ A++AS M+GI+T V
Sbjct: 540 VGEEVWHSKWYDAKEAS-MEGIVTIV 564
>M22094-1|AAA59910.1| 165|Homo sapiens NCAM protein.
Length = 165
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 IGEKVW-ARWFTARKASWMKGIITNV 189
+GE+VW ++W+ A++AS M+GI+T V
Sbjct: 50 VGEEVWHSKWYDAKEAS-MEGIVTIV 74
>M22092-1|AAA59911.1| 165|Homo sapiens neural cell adhesion
molecule protein.
Length = 165
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 IGEKVW-ARWFTARKASWMKGIITNV 189
+GE+VW ++W+ A++AS M+GI+T V
Sbjct: 50 VGEEVWHSKWYDAKEAS-MEGIVTIV 74
>M17410-1|AAA59913.1| 355|Homo sapiens NCAM protein.
Length = 355
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 IGEKVW-ARWFTARKASWMKGIITNV 189
+GE+VW ++W+ A++AS M+GI+T V
Sbjct: 50 VGEEVWHSKWYDAKEAS-MEGIVTIV 74
>M17409-1|AAA59912.1| 271|Homo sapiens NCAM protein.
Length = 271
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 IGEKVW-ARWFTARKASWMKGIITNV 189
+GE+VW ++W+ A++AS M+GI+T V
Sbjct: 50 VGEEVWHSKWYDAKEAS-MEGIVTIV 74
>BC047244-1|AAH47244.1| 858|Homo sapiens neural cell adhesion
molecule 1 protein.
Length = 858
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 IGEKVW-ARWFTARKASWMKGIITNV 189
+GE+VW ++W+ A++AS M+GI+T V
Sbjct: 550 VGEEVWHSKWYDAKEAS-MEGIVTIV 574
>BC014205-1|AAH14205.2| 601|Homo sapiens NCAM1 protein protein.
Length = 601
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 IGEKVW-ARWFTARKASWMKGIITNV 189
+GE+VW ++W+ A++AS M+GI+T V
Sbjct: 293 VGEEVWHSKWYDAKEAS-MEGIVTIV 317
>AB209443-1|BAD92680.1| 807|Homo sapiens Neural cell adhesion
molecule 1, 120 kDa isoform precursor variant protein.
Length = 807
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Frame = +1
Query: 115 IGEKVW-ARWFTARKASWMKGIITNV 189
+GE+VW ++W+ A++AS M+GI+T V
Sbjct: 621 VGEEVWHSKWYDAKEAS-MEGIVTIV 645
>BC015211-1|AAH15211.1| 285|Homo sapiens PHD finger protein 20-like
1 protein.
Length = 285
Score = 29.1 bits (62), Expect = 9.3
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = +1
Query: 109 FKIGEKVWARWFTARKASWMKGIITNVTGNRMFHIKFENCVNPCIRHLDQIRKYTESKTD 288
FK GE+V ARW R + I + F ++F + V C++ + ++K
Sbjct: 87 FKAGEEVLARWTDCR---YYPAKIEAINKEGTFTVQFYDGVIRCLKRMHIKAMPEDAKGQ 143
Query: 289 INVSDVDFAGSASVRDRPGS 348
++ V A +A+ +++ GS
Sbjct: 144 DWIALVKAAAAAAAKNKTGS 163
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,140,190
Number of Sequences: 237096
Number of extensions: 1402730
Number of successful extensions: 3999
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3997
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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