Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C03
         (507 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA ...    31   1.2  
U70874-1|AAB09592.1|  666|Drosophila melanogaster hepatocyte nuc...    29   2.7  
BT003612-1|AAO39615.1|  521|Drosophila melanogaster GH15792p pro...    29   2.7  
BT003533-1|AAO39537.1|  704|Drosophila melanogaster RE09535p pro...    29   2.7  
BT001800-1|AAN71555.1|  738|Drosophila melanogaster RH29074p pro...    29   2.7  
AE014297-1059|AAF54468.3|  521|Drosophila melanogaster CG33975-P...    29   2.7  
AE014134-1555|AAF52703.1|  666|Drosophila melanogaster CG9310-PC...    29   2.7  
AE014134-1554|AAN10680.1|  732|Drosophila melanogaster CG9310-PB...    29   2.7  
AE014134-1553|AAF52702.2|  704|Drosophila melanogaster CG9310-PA...    29   2.7  
DQ139958-1|ABA06529.1|  309|Drosophila melanogaster TipE-like pr...    29   4.8  
AE014297-3882|AAF56535.1|  296|Drosophila melanogaster CG14546-P...    29   4.8  
AE014296-784|AAF47854.1|  309|Drosophila melanogaster CG15004-PA...    29   4.8  

>AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA
            protein.
          Length = 2296

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = -2

Query: 470  STVLGVDIGAGSSTPDGGLNEGGGDSELSLDVDCTGRTHLVEPGRSLTDALPAKST 303
            S+ L + +G GSST  GG   GGGD+    D    G+T  V     LT +    S+
Sbjct: 1977 SSSLSLSLGVGSSTGGGGGGAGGGDNH---DKTADGKTITVLSNVLLTSSSVVSSS 2029


>U70874-1|AAB09592.1|  666|Drosophila melanogaster hepatocyte
           nuclear factor 4 homologprotein.
          Length = 666

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 394 QSSALMLIVPVAHISSSRAGPSPT-HFQQNQH 302
           Q  +  L +PV H + SR+GP PT H  Q  H
Sbjct: 555 QQESSYLDMPVKHYNGSRSGPLPTQHSPQRMH 586


>BT003612-1|AAO39615.1|  521|Drosophila melanogaster GH15792p
           protein.
          Length = 521

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -3

Query: 334 PSPTHFQQNQHHSH 293
           PSPT+ QQ QHH H
Sbjct: 323 PSPTYVQQQQHHQH 336


>BT003533-1|AAO39537.1|  704|Drosophila melanogaster RE09535p
           protein.
          Length = 704

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 394 QSSALMLIVPVAHISSSRAGPSPT-HFQQNQH 302
           Q  +  L +PV H + SR+GP PT H  Q  H
Sbjct: 593 QQESSYLDMPVKHYNGSRSGPLPTQHSPQRMH 624


>BT001800-1|AAN71555.1|  738|Drosophila melanogaster RH29074p
           protein.
          Length = 738

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 394 QSSALMLIVPVAHISSSRAGPSPT-HFQQNQH 302
           Q  +  L +PV H + SR+GP PT H  Q  H
Sbjct: 627 QQESSYLDMPVKHYNGSRSGPLPTQHSPQRMH 658


>AE014297-1059|AAF54468.3|  521|Drosophila melanogaster CG33975-PA
           protein.
          Length = 521

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -3

Query: 334 PSPTHFQQNQHHSH 293
           PSPT+ QQ QHH H
Sbjct: 323 PSPTYVQQQQHHQH 336


>AE014134-1555|AAF52703.1|  666|Drosophila melanogaster CG9310-PC,
           isoform C protein.
          Length = 666

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 394 QSSALMLIVPVAHISSSRAGPSPT-HFQQNQH 302
           Q  +  L +PV H + SR+GP PT H  Q  H
Sbjct: 555 QQESSYLDMPVKHYNGSRSGPLPTQHSPQRMH 586


>AE014134-1554|AAN10680.1|  732|Drosophila melanogaster CG9310-PB,
           isoform B protein.
          Length = 732

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 394 QSSALMLIVPVAHISSSRAGPSPT-HFQQNQH 302
           Q  +  L +PV H + SR+GP PT H  Q  H
Sbjct: 621 QQESSYLDMPVKHYNGSRSGPLPTQHSPQRMH 652


>AE014134-1553|AAF52702.2|  704|Drosophila melanogaster CG9310-PA,
           isoform A protein.
          Length = 704

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 394 QSSALMLIVPVAHISSSRAGPSPT-HFQQNQH 302
           Q  +  L +PV H + SR+GP PT H  Q  H
Sbjct: 593 QQESSYLDMPVKHYNGSRSGPLPTQHSPQRMH 624


>DQ139958-1|ABA06529.1|  309|Drosophila melanogaster TipE-like
           protein 2 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 26/91 (28%), Positives = 40/91 (43%)
 Frame = -2

Query: 437 SSTPDGGLNEGGGDSELSLDVDCTGRTHLVEPGRSLTDALPAKSTSLTLMSVLDSVYFLI 258
           +S+  G    G G +  S+   C      V PG    DA+ AK   + + ++L+   F  
Sbjct: 32  NSSRCGSAGSGCGSASGSMRSACQSP---VRPGSGCVDAIKAKREEIEMDTLLEKAKFYT 88

Query: 257 *SKCLIHGLTQFSNLI*NILFPVTFVMIPFI 165
            S CL  G T   ++    LF + FV+ P I
Sbjct: 89  -SVCL--GTTAILSVF-TFLFLIPFVVDPAI 115


>AE014297-3882|AAF56535.1|  296|Drosophila melanogaster CG14546-PA
           protein.
          Length = 296

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 349 SSRAGPSPTHFQQNQHHS 296
           S R  P+PT F QNQH S
Sbjct: 229 SGRTSPNPTRFNQNQHAS 246


>AE014296-784|AAF47854.1|  309|Drosophila melanogaster CG15004-PA
           protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 26/91 (28%), Positives = 40/91 (43%)
 Frame = -2

Query: 437 SSTPDGGLNEGGGDSELSLDVDCTGRTHLVEPGRSLTDALPAKSTSLTLMSVLDSVYFLI 258
           +S+  G    G G +  S+   C      V PG    DA+ AK   + + ++L+   F  
Sbjct: 32  NSSRCGSAGSGCGSASGSMRSACQSP---VRPGSGCVDAIKAKREEIEMDTLLEKAKFYT 88

Query: 257 *SKCLIHGLTQFSNLI*NILFPVTFVMIPFI 165
            S CL  G T   ++    LF + FV+ P I
Sbjct: 89  -SVCL--GTTAILSVF-TFLFLIPFVVDPAI 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,938,814
Number of Sequences: 53049
Number of extensions: 445906
Number of successful extensions: 2168
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2143
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)