Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C02
         (456 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   3.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   9.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   9.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   9.5  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 326 LKEVSQIPDQALPQEKQSSGLAPSGG 403
           L+E    PD+ LP ++++  L+P  G
Sbjct: 180 LREERCDPDRPLPLDQKARDLSPRNG 205


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = -1

Query: 270 DCPGYLFCLQL*HVLSSISQSCQHPGCYP-QQGVCS 166
           DC  Y  C+     L SI + C H   Y  +  +C+
Sbjct: 454 DCSVYYTCVSDGSKLVSIQRKCNHGLVYDLELNICN 489


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 182 SRVCAVNGKFKANLPLGTFAANFAT 108
           +R+ A  G+     P+GT A  F+T
Sbjct: 211 TRLSATKGRLVITEPVGTKAPAFST 235


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 225  KERVKVEGKTNNLGNHVVIARDKTKVAINADIP 323
            K  ++  G  N  GN+ V+AR+  + ++ + IP
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH-RNSVASSIP 1515


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 225  KERVKVEGKTNNLGNHVVIARDKTKVAINADIP 323
            K  ++  G  N  GN+ V+AR+  + ++ + IP
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH-RNSVASSIP 1515


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 225  KERVKVEGKTNNLGNHVVIARDKTKVAINADIP 323
            K  ++  G  N  GN+ V+AR+  + ++ + IP
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH-RNSVASSIP 1515


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 225  KERVKVEGKTNNLGNHVVIARDKTKVAINADIP 323
            K  ++  G  N  GN+ V+AR+  + ++ + IP
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH-RNSVASSIP 1515


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 1   ARGSATRVLLPRWQLQ 48
           ARG     L+PRW  Q
Sbjct: 572 ARGIHAEALVPRWCYQ 587


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 317 HSLLKEVSQIPDQALPQEKQSSGLAPSG 400
           H LL  +  + D +  Q  Q  GLA  G
Sbjct: 360 HELLGHMPLLADPSFAQFSQEIGLASLG 387


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 152 KANLPLGTFAANFATFYSFLTSL 84
           K NL LGT+   FA      TSL
Sbjct: 256 KINLGLGTYGRGFALADPTNTSL 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,048
Number of Sequences: 336
Number of extensions: 2136
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)