Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_C01
         (401 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   1.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   2.4  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    22   7.3  
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    22   9.6  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 69  ERPAPRSSPRQGWPTT 22
           + P+PR + ++GW TT
Sbjct: 212 QTPSPRDNAKKGWKTT 227


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +3

Query: 210  NGIPFNFESLMEGGTGLTPVHPHPCAHH 293
            NG   N  S     T  +  HPHP  HH
Sbjct: 1380 NGCAPNLLSSTTSTTNFSYQHPHPHHHH 1407



 Score = 23.0 bits (47), Expect = 4.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 117 QVPLSLTPAQLHNNKALGNNKIAGIE 194
           QVPL+L   +L     LG N I+ IE
Sbjct: 478 QVPLALKDMRLLRTVDLGENSISVIE 503


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 54  AAQVALDTPPAISRPNR 104
           AA +A +TPP+ S+P +
Sbjct: 26  AASLAANTPPSASQPKQ 42


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 12/57 (21%), Positives = 18/57 (31%)
 Frame = -3

Query: 183 LFCCYRALCCYVTXXXXXXXXXVGS*VCWDARWPAVCRERPAPRSSPRQGWPTTTLF 13
           L CC   L   +                +D    +  RE+P  R  P +  P   +F
Sbjct: 5   LLCCVPLLAALLVSSTTAQHAEDALKQSYDGTESSAVREQPEQRCVPTKECPPDEVF 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,887
Number of Sequences: 2352
Number of extensions: 5553
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)