Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B24
         (206 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   0.59 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   0.78 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   1.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    19   4.1  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    19   4.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    19   4.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   5.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    19   7.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        19   7.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    19   7.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    19   7.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    18   9.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    18   9.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    18   9.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    18   9.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    18   9.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    18   9.6  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 0.59
 Identities = 8/19 (42%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = -2

Query: 163 ITRNL-LAIIQYFLYMVCA 110
           ITR L L+ + YF++++C+
Sbjct: 386 ITRGLILSFVDYFVFLLCS 404


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 0.78
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 196 LCFLDTYLVSFITRNLLAIIQY 131
           +C L  ++ +  T  +LAI QY
Sbjct: 190 ICLLAWFIAALFTSPILAITQY 211


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 79  CSGFTRPDISEPLD 38
           CS FT P+I   LD
Sbjct: 309 CSNFTLPEIQHNLD 322


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 182 YIFSKLYYA*SPRYNTIFFVHGM 114
           +I  K YY    +YN I   +G+
Sbjct: 120 HICDKFYYCVDGKYNMITCPNGL 142


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -2

Query: 205 CIHLCFLDTYLV 170
           C H+ FL+ Y++
Sbjct: 11  CAHVVFLEEYVI 22


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 80  LLGLHKARY**AT*QMFVAPRAEFLL 3
           LLG H+  Y   T   F+AP   +LL
Sbjct: 99  LLGNHQLVYNCHTFGRFLAPNLTYLL 124


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 73  GFTRPDISEPLDKCSSRLVPN 11
           G+T  D  E +D CS+    N
Sbjct: 90  GYTGKDCGEYVDWCSTNPCEN 110


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +1

Query: 112 HIPCTKNIV 138
           H+PC  N+V
Sbjct: 944 HMPCPSNLV 952


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 135 CIIARRLRV 161
           C+I+R+LRV
Sbjct: 74  CVISRQLRV 82


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 99  LGRHAHTMYKKYCII 143
           LG+    MY  YC++
Sbjct: 273 LGKAYSGMYSMYCLL 287


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 99  LGRHAHTMYKKYCII 143
           LG+    MY  YC++
Sbjct: 273 LGKAYSGMYSMYCLL 287


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 101 RPTRTYHVQ 127
           RP  TYH++
Sbjct: 962 RPATTYHIR 970


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
          protein.
          Length = 1464

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = +2

Query: 20 EARRTFVKW 46
          E +RT+++W
Sbjct: 47 EVKRTYIEW 55


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
          CHS2 protein.
          Length = 1464

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = +2

Query: 20 EARRTFVKW 46
          E +RT+++W
Sbjct: 47 EVKRTYIEW 55


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -1

Query: 143 YNTIFFV 123
           YNT+FF+
Sbjct: 287 YNTLFFI 293


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 1   TSRNSARGATNIC 39
           TSR SA G  ++C
Sbjct: 144 TSRTSACGLFSVC 156


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -1

Query: 179 IFSKLYYA*SPRYNTIFFVHGMCVSA*KPLNF*LLGLHK 63
           +FSK      P Y     V  + V A + L F LL L K
Sbjct: 125 VFSKQIRQEKPYYIADPEVDSLMVQAIQVLRFHLLELEK 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,051
Number of Sequences: 336
Number of extensions: 844
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2587224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)