Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B24
         (206 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118340-1|AAM48369.1|  638|Drosophila melanogaster LD44182p pro...    26   8.3  
AY069429-1|AAL39574.1|  479|Drosophila melanogaster LD13887p pro...    26   8.3  
AE014296-1669|AAF50260.2|  783|Drosophila melanogaster CG32043-P...    26   8.3  
AE014296-1668|AAF50261.2|  783|Drosophila melanogaster CG32043-P...    26   8.3  

>AY118340-1|AAM48369.1|  638|Drosophila melanogaster LD44182p
           protein.
          Length = 638

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 60  GLVKPEQLKVQRLLGRHAHTMYKKYCI 140
           GL KPEQ+K  R LG+   T +  +CI
Sbjct: 438 GLNKPEQIKFARYLGQGLPT-FTLFCI 463


>AY069429-1|AAL39574.1|  479|Drosophila melanogaster LD13887p
           protein.
          Length = 479

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 60  GLVKPEQLKVQRLLGRHAHTMYKKYCI 140
           GL KPEQ+K  R LG+   T +  +CI
Sbjct: 134 GLNKPEQIKFARYLGQGLPT-FTLFCI 159


>AE014296-1669|AAF50260.2|  783|Drosophila melanogaster CG32043-PB,
           isoform B protein.
          Length = 783

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 60  GLVKPEQLKVQRLLGRHAHTMYKKYCI 140
           GL KPEQ+K  R LG+   T +  +CI
Sbjct: 438 GLNKPEQIKFARYLGQGLPT-FTLFCI 463


>AE014296-1668|AAF50261.2|  783|Drosophila melanogaster CG32043-PA,
           isoform A protein.
          Length = 783

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 60  GLVKPEQLKVQRLLGRHAHTMYKKYCI 140
           GL KPEQ+K  R LG+   T +  +CI
Sbjct: 438 GLNKPEQIKFARYLGQGLPT-FTLFCI 463


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,676,112
Number of Sequences: 53049
Number of extensions: 137972
Number of successful extensions: 337
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 24,988,368
effective HSP length: 48
effective length of database: 22,442,016
effective search space used: 448840320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)