Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B24
         (206 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   0.88 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   1.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   3.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    20   3.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   3.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    19   6.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   6.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   6.2  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 0.88
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 30  EHLSSGSLISGLVKPEQLK 86
           E+LSSG  IS   KPE  K
Sbjct: 540 ENLSSGLSISDSTKPETSK 558


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 1.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 116 YHVQKILYYSEEIT 157
           +HVQ++LY  E+ T
Sbjct: 276 FHVQRLLYVYEDST 289


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 3.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 196 LCFLDTYLVSFITRNLLAIIQYF 128
           +C+L+T+L+      +  I+Q F
Sbjct: 563 VCYLNTFLLLATPTTVTCILQRF 585


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.8 bits (39), Expect = 3.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 123 YKKYCIIARRLRVIKLTKYVSRKHRCI 203
           Y++  I+     +I + KY+  KH+ I
Sbjct: 91  YEENTILTTMPLLINVVKYLGGKHKFI 117


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.8 bits (39), Expect = 3.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 196 LCFLDTYLVSFITRNLLAIIQYF 128
           +C+L+T+L+      +  I+Q F
Sbjct: 653 VCYLNTFLLLATPTTVTCILQRF 675


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.0 bits (37), Expect = 6.2
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 83  KSSTAFRPTRTYHV 124
           K  T  +PT  YHV
Sbjct: 252 KPQTKTKPTSPYHV 265


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 19.0 bits (37), Expect = 6.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 39   SSGSLISGLVKPEQLKVQR 95
            +SGS++ G  +P Q + Q+
Sbjct: 1220 NSGSVVLGKQQPSQQQTQQ 1238


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.0 bits (37), Expect = 6.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 57  SGLVKPEQLKVQRLLGRHAH 116
           +GL+K E L+    L  H H
Sbjct: 130 TGLIKQETLQRHHHLQNHHH 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,828
Number of Sequences: 438
Number of extensions: 874
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2912559
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)