Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B23
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   2.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   2.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   2.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   8.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   8.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 56  IEFSECSFFLI 88
           +EFS C FFLI
Sbjct: 342 LEFSACGFFLI 352


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 56  IEFSECSFFLI 88
           +EFS C FFLI
Sbjct: 167 LEFSACGFFLI 177


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 291 VETVEYKNISFTVWDVGGQDKIRPL 365
           +E +  KNI  TV + G   K++PL
Sbjct: 540 LEELNLKNIDLTVLESGAFCKMQPL 564


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 266 CNNFT*FEF 240
           CN+FT FEF
Sbjct: 445 CNSFTKFEF 453


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 220 PAASKPTINILISFLPKRPFK*ICKHIPHFYA 125
           P   KP  +     LP+ P      H+P+F A
Sbjct: 260 PPNRKPRTDFKPQVLPQWPSPIGASHLPYFAA 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,379
Number of Sequences: 336
Number of extensions: 2997
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)