Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B22
         (418 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.22 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.22 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.22 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.22 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.22 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.22 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.22 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.30 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.4  

>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 331 ISVSCSPPMYPGTDACSQN 275
           +SVS SPP  P T   SQN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 331 ISVSCSPPMYPGTDACSQN 275
           +SVS SPP  P T   SQN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 331 ISVSCSPPMYPGTDACSQN 275
           +SVS SPP  P T   SQN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 331 ISVSCSPPMYPGTDACSQN 275
           +SVS SPP  P T   SQN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 331 ISVSCSPPMYPGTDACSQN 275
           +SVS SPP  P T   SQN
Sbjct: 103 LSVSTSPPGKPATSTASQN 121


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 331 ISVSCSPPMYPGTDACSQN 275
           +SVS SPP  P T   SQN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 331 ISVSCSPPMYPGTDACSQN 275
           +SVS SPP  P T   SQN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 331 ISVSCSPPMYPGTDACSQN 275
           +SVS SPP  P T   SQN
Sbjct: 147 LSVSTSPPGKPATSTTSQN 165


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/43 (20%), Positives = 17/43 (39%)
 Frame = +1

Query: 82  TVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAE 210
           T+S  CK        +  H+ V F +++   ++    G    E
Sbjct: 31  TISQGCKACGYHSPLESNHKLVTFILKNPPNLNPAVQGSSLTE 73


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 138  VFLILFYFFVCRFASVRYCHTRRHFLMLKHVKI 40
            V L   Y F+C F    +    R  L++K + I
Sbjct: 1127 VLLNCVYLFLCGFCVYEFASDERIKLVIKAIII 1159


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -2

Query: 186 FDVDLFLVANVEHHVA--VFLILFYFFVCRF 100
           F V L  +  + + V    FL+  Y+F C F
Sbjct: 123 FTVHLLFLLCIYYFVVPLFFLLCIYYFYCAF 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,309
Number of Sequences: 336
Number of extensions: 2063
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)