Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B22
(418 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 91 2e-19
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 91 4e-19
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 89 1e-18
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 89 1e-18
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 89 1e-18
03_06_0479 + 34217170-34217172,34217337-34217786 85 2e-17
05_01_0103 + 686770-687017,687120-687270 83 7e-17
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 82 2e-16
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 69 2e-12
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 49 1e-06
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 30 0.65
04_03_0226 - 12977443-12977895 28 3.5
07_01_0458 + 3477137-3477426,3478291-3478417 27 4.6
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 27 4.6
12_02_0346 - 17776871-17781445 27 6.0
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 27 6.0
03_06_0040 + 31240164-31241102,31241280-31241897 27 6.0
04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527 27 8.0
04_01_0190 - 2234038-2234674,2237128-2237665,2239294-2239378 27 8.0
01_03_0153 + 13255667-13255954,13258383-13258529,13258798-132589... 27 8.0
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 91.5 bits (217), Expect = 2e-19
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Frame = +1
Query: 70 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 246
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G YD F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 247 TGQCRYGLFDFDYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 414
+CRY +FDFD+ T E +K K+F +SW PDT+KV+ KMLY+SS D K+
Sbjct: 326 ASECRYAVFDFDFV-----TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKR 376
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 90.6 bits (215), Expect = 4e-19
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = +1
Query: 70 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 246
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G YD F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 247 TGQCRYGLFDFDYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 414
+CRY +FDFD+ T E +K K+F +SW PDT++V+ KMLY+SS D K+
Sbjct: 81 ADECRYAVFDFDFV-----TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKR 131
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 89.4 bits (212), Expect = 1e-18
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = +1
Query: 58 HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGGRNAEYDSFLEDL 234
H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G YD FL L
Sbjct: 7 HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASL 66
Query: 235 QKGGTGQCRYGLFDFDYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 414
+ CRY L+DFD+ T E +K K+F ++W P T++++ KMLYS+S D +K+
Sbjct: 67 PEN---DCRYALYDFDFV-----TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQ 118
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 89.0 bits (211), Expect = 1e-18
Identities = 40/116 (34%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Frame = +1
Query: 70 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 246
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G +D F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 247 TGQCRYGLFDFDYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 414
CRY ++DFD+ T E +K K+F ++W P ++++ KMLY++S + ++
Sbjct: 69 -SDCRYAIYDFDFV-----TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRR 118
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = +1
Query: 70 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 246
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G R Y+ F L +G
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG- 82
Query: 247 TGQCRYGLFDFDYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 414
CR+ ++DFD+ T+E K ++F + W PD AKV+ KMLY+SS + KK
Sbjct: 83 --DCRFAIYDFDFL-----TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKK 131
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 85.4 bits (202), Expect = 2e-17
Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 7/121 (5%)
Frame = +1
Query: 73 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGGT 249
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +D L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 250 GQCRYGLFDFDYT-HQCQGTSEASK-----KQKLFLMSWCPDTAKVKKKMLYSSSFDALK 411
CRY ++D D+T T+ A + + K+F +SW P A V+ KM+Y+SS + K
Sbjct: 65 --CRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFK 122
Query: 412 K 414
K
Sbjct: 123 K 123
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 83.4 bits (197), Expect = 7e-17
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Frame = +1
Query: 79 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGGRNAEYDSFLEDLQKGGTGQ 255
+ V D CK + E+K + +R++++ I ++K+ + VE VG YD F L +
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 256 CRYGLFDFDYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 414
CRY +FD+D+ T E +K K+F ++W PDT++V+ KM+Y+SS D K+
Sbjct: 58 CRYAIFDYDFV-----TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKR 105
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 81.8 bits (193), Expect = 2e-16
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 76 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGGRNAEYDSFLEDLQKGGTG 252
G+ V+D CK ++E+K + R++VF I D+ +I VE +G Y+ F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 253 QCRYGLFDFDYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 414
+CRY ++D D+ T E +K K+F SW PDTA+ + KMLY+SS D ++
Sbjct: 70 ECRYAVYDLDFV-----TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRR 118
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 68.5 bits (160), Expect = 2e-12
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +1
Query: 79 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGGRNAEYDSFLEDLQKGGTGQ 255
+ V + K+ + E+K+ K HRYV+F I D + +I VE G YD F L
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 256 CRYGLFDFDYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSS 396
CRY ++D D+ + + +K K+F +SW P ++++ K +Y+ S
Sbjct: 77 CRYAVYDLDFV-----SDDNCRKSKIFFISWSPSVSRIRAKTIYAVS 118
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 49.2 bits (112), Expect = 1e-06
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 79 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGGRNAEYDSFLEDLQKGGTGQ 255
+ V + K+ + E+ + K HRYV+F I D + +I VE G YD F L
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLPAD---- 95
Query: 256 CRYGLFDFDYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 390
++D D+ + + +K K+F +SW P + ++ K +Y+
Sbjct: 96 ---AVYDLDFV-----SDDNCRKSKIFFISWSPSLSCIRAKTIYA 132
>10_08_0472 -
18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 30.3 bits (65), Expect = 0.65
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 273 EETISALSGAALLQVFEKAIVFGITSADGFDVD 175
+ET+ A+ ++FEK +V I+S DG+D +
Sbjct: 541 QETVDAVHSEICGKLFEKVVVEAISSVDGYDTN 573
>04_03_0226 - 12977443-12977895
Length = 150
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 157 IRDEKQIDVETVGGRNAEYDSFLEDLQKGG 246
+R+E +D+E GG AE + DL+ GG
Sbjct: 112 MREEAAVDLEPGGGGGAEEEEAAVDLEPGG 141
>07_01_0458 + 3477137-3477426,3478291-3478417
Length = 138
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 328 SVSCSPPMYPGTDACSQNRRDHICIVRCRPSAG 230
+ + SP Y A S RR + +VRC P +G
Sbjct: 13 AAAVSPSCYASPAASSVRRRGVVGVVRCAPDSG 45
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 157 IRDEKQIDVETVGGR-NAEYDSFLEDLQKGGT 249
+RDEK++DV +GG ++SF Q+ T
Sbjct: 10 VRDEKKVDVAAIGGAPPIVFESFAPSTQRDST 41
>12_02_0346 - 17776871-17781445
Length = 1524
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 361 RCLGTTTLGTISVSCSPPMYPGTDAC-SQNRRDHI 260
RCL T +G + CSPP DA ++ H+
Sbjct: 147 RCLPATAVGKLLPCCSPPTVHNDDAAGAKTNEQHL 181
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +1
Query: 319 KKQKLFLMSWCPDTAKVKKKMLYSSSFD 402
+ ++FL++ P +V +KM++ S+FD
Sbjct: 559 RNSRVFLVTMSPTHTRVDRKMMFHSNFD 586
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 170 NRSTSKPSADVMPNTIAFSKTCRRAAPD-NADM 265
NR + S V+ IA SKT RR APD + DM
Sbjct: 176 NRRLFELSLSVLMEAIAQSKTTRREAPDADTDM 208
>04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527
Length = 281
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 122 KRIRNTATWCSTFATRNRSTSKPSADVM 205
+R+ WCS F T++R + + + DV+
Sbjct: 222 ERVIMLGLWCSAFETKHRPSMRQAMDVL 249
>04_01_0190 - 2234038-2234674,2237128-2237665,2239294-2239378
Length = 419
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 146 WCSTFATRNRSTSKPSADVM 205
WCS F T++R T + + DV+
Sbjct: 368 WCSAFETQHRPTMQKAMDVL 387
>01_03_0153 +
13255667-13255954,13258383-13258529,13258798-13258932,
13259344-13259461,13260925-13261049,13261407-13261532,
13261617-13261697,13262188-13262250,13262328-13262402,
13263439-13263517,13263627-13263727,13263952-13264065,
13264225-13264338,13264406-13264477,13264561-13264608
Length = 561
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 105 RFASVRYCHTRRHFLMLKHVKIAPLILTTPRQ 10
R A +R+C RR L L+ ++ P TPR+
Sbjct: 27 RPAELRFCGLRREALGLRSLRAPPRAAATPRK 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,244,749
Number of Sequences: 37544
Number of extensions: 213793
Number of successful extensions: 757
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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