Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B22
         (418 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.8  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   2.4  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   5.6  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   5.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   9.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   9.7  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 63  LMLKHVKIAPLILTTP 16
           L LKH++ A L+LT P
Sbjct: 64  LNLKHLRAAVLVLTNP 79


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 413 FFSASKELEYNIFFLTLAV 357
           FFS+ K+  Y +FF+ + +
Sbjct: 2   FFSSGKQQVYQLFFIQIVL 20


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 251 PVPPFCRSSRKL 216
           P PPFC  + KL
Sbjct: 82  PSPPFCEKNPKL 93


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 251 PVPPFCRSSRKL 216
           P PPFC  + KL
Sbjct: 83  PSPPFCEKNPKL 94


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 244 GTGQCRYGLFDFDY 285
           GTG  R   ++FDY
Sbjct: 129 GTGNSRANTYNFDY 142


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 349 TTTLGTISVSCSPPMYPGTD 290
           T  +GT  +   P +YP  D
Sbjct: 439 TVVIGTFKLHRQPHIYPNPD 458


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 280 DYTHQCQGTSEASKKQKLFLMSWCP 354
           +Y H+   T E S+  K+  + W P
Sbjct: 317 NYHHRNADTHEMSEWVKVVFLYWLP 341


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,245
Number of Sequences: 438
Number of extensions: 2251
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)