Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B21
(568 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62424 Cluster: 60S ribosomal protein L7a; n=226; Eukar... 161 1e-38
UniRef50_UPI0000E1EF65 Cluster: PREDICTED: similar to 60S riboso... 155 9e-37
UniRef50_Q966C6-2 Cluster: Isoform c of Q966C6 ; n=4; Bilateria|... 142 5e-33
UniRef50_Q3SAE2 Cluster: Ribosomal protein L7A; n=2; Bigelowiell... 138 6e-32
UniRef50_Q5DG58 Cluster: SJCHGC02816 protein; n=1; Schistosoma j... 137 1e-31
UniRef50_UPI0001552F1A Cluster: PREDICTED: similar to Ribosomal ... 134 1e-30
UniRef50_Q54ZD1 Cluster: 60S ribosomal protein L7a; n=2; Dictyos... 127 2e-28
UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containin... 127 2e-28
UniRef50_Q4VH13 Cluster: Rpl7A; n=2; Euglena gracilis|Rep: Rpl7A... 127 2e-28
UniRef50_A7APX8 Cluster: Ribosomal protein L7Ae family protein; ... 127 2e-28
UniRef50_Q3T2L9 Cluster: Rpl7A; n=2; Jakoba libera|Rep: Rpl7A - ... 122 6e-27
UniRef50_Q75CI9 Cluster: ACL070Cp; n=31; Eukaryota|Rep: ACL070Cp... 118 1e-25
UniRef50_P29453 Cluster: 60S ribosomal protein L8-B; n=55; Eukar... 118 1e-25
UniRef50_Q6CQ17 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 117 2e-25
UniRef50_A0CSP0 Cluster: Chromosome undetermined scaffold_26, wh... 116 4e-25
UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=... 114 1e-24
UniRef50_Q9NBK2 Cluster: Ribosomal protein L7a; n=3; Caenorhabdi... 109 3e-23
UniRef50_Q7RAN9 Cluster: 60S ribosomal protein L7a; n=7; Plasmod... 105 7e-22
UniRef50_UPI00005A55A3 Cluster: PREDICTED: similar to 60S riboso... 88 2e-21
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 99 4e-20
UniRef50_UPI0001553583 Cluster: PREDICTED: similar to ribosomal ... 100 5e-20
UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=... 97 2e-19
UniRef50_A7U817 Cluster: Ribosomal protein L7A; n=9; Giardia int... 93 4e-18
UniRef50_UPI0000499ADF Cluster: 60S ribosomal protein L7a; n=3; ... 91 2e-17
UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleu... 86 5e-16
UniRef50_Q7TQ86 Cluster: Ac1158; n=8; Eumetazoa|Rep: Ac1158 - Ra... 74 2e-12
UniRef50_UPI000156049B Cluster: PREDICTED: hypothetical protein;... 68 2e-10
UniRef50_UPI0000DC13DB Cluster: UPI0000DC13DB related cluster; n... 59 6e-08
UniRef50_UPI000056487F Cluster: UPI000056487F related cluster; n... 58 1e-07
UniRef50_Q98RU4 Cluster: 60s ribosomal protein L7A; n=1; Guillar... 54 2e-06
UniRef50_UPI0000DA34B6 Cluster: PREDICTED: similar to 60S riboso... 48 1e-04
UniRef50_Q07880 Cluster: Putative uncharacterized protein YLL044... 48 2e-04
UniRef50_UPI0000DC0A94 Cluster: UPI0000DC0A94 related cluster; n... 42 0.010
UniRef50_Q8SSG1 Cluster: 60S RIBOSOMAL PROTEIN L7A /yeast L8; n=... 42 0.010
UniRef50_Q1GKA5 Cluster: Transcriptional regulator TetR family; ... 41 0.018
UniRef50_UPI0000DA4476 Cluster: PREDICTED: similar to 60S riboso... 40 0.054
UniRef50_Q6N1R6 Cluster: Transcriptional regulator, TetR family;... 32 8.1
>UniRef50_P62424 Cluster: 60S ribosomal protein L7a; n=226;
Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens
(Human)
Length = 266
Score = 161 bits (391), Expect = 1e-38
Identities = 79/130 (60%), Positives = 89/130 (68%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
TA L K+ KYRPET + RP LRAG NTVT LVE K
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENK 150
Query: 537 KAQLVVIAHD 566
KAQLVVIAHD
Sbjct: 151 KAQLVVIAHD 160
>UniRef50_UPI0000E1EF65 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a (Surfeit locus protein 3) isoform 3; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S
ribosomal protein L7a (Surfeit locus protein 3) isoform
3 - Pan troglodytes
Length = 243
Score = 155 bits (375), Expect = 9e-37
Identities = 77/130 (59%), Positives = 87/130 (66%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
LFEKR KNF IGQDIQP RDL+ FV+WP YIR+QRQ+A+L +RLKVPP INQFTQ LD+
Sbjct: 28 LFEKRPKNFGIGQDIQPKRDLTCFVKWPCYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 87
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
TA L K+ KYRPET + RP LRAG NT+T LVE K
Sbjct: 88 TATQLLKLAHKYRPETKQEKKQRPLAQAEKRAAGKGDVPIKRPPVLRAGVNTITTLVENK 147
Query: 537 KAQLVVIAHD 566
KAQLVVIAHD
Sbjct: 148 KAQLVVIAHD 157
>UniRef50_Q966C6-2 Cluster: Isoform c of Q966C6 ; n=4;
Bilateria|Rep: Isoform c of Q966C6 - Caenorhabditis
elegans
Length = 245
Score = 142 bits (344), Expect = 5e-33
Identities = 73/130 (56%), Positives = 92/130 (70%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
LFEKR +NF IGQDIQP +D++RFV+WPKYIR+QRQ A+LQ+RLKVPP INQF LD
Sbjct: 32 LFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALDSQ 91
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
+A+ FK+L+KYRPE+ E T RPNT+R G NT+T+LVE +
Sbjct: 92 SARQAFKLLDKYRPES-------------------TEVT-KRPNTVRHGVNTITRLVETR 131
Query: 537 KAQLVVIAHD 566
+AQLV+IAHD
Sbjct: 132 RAQLVLIAHD 141
>UniRef50_Q3SAE2 Cluster: Ribosomal protein L7A; n=2; Bigelowiella
natans|Rep: Ribosomal protein L7A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 248
Score = 138 bits (335), Expect = 6e-32
Identities = 65/130 (50%), Positives = 85/130 (65%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
LF+K K+F IG+ +QP ++LSRFV+WP+YIRIQRQKA+L++RL+VPP +NQFT T+DK
Sbjct: 29 LFKKTPKDFRIGRSVQPKQNLSRFVKWPRYIRIQRQKAILKQRLRVPPAVNQFTNTIDKN 88
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
A LFK+L KYRPE +P L+ G N +T LVE +
Sbjct: 89 QAMTLFKLLAKYRPENRKEKQERLKAIAEEKVKNAKSGNKDKPKVLKYGLNHITSLVESR 148
Query: 537 KAQLVVIAHD 566
KA+LVVIAHD
Sbjct: 149 KAKLVVIAHD 158
>UniRef50_Q5DG58 Cluster: SJCHGC02816 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02816 protein - Schistosoma
japonicum (Blood fluke)
Length = 252
Score = 137 bits (332), Expect = 1e-31
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
L ++R KNF IGQ+IQP R+L RFV+WPKYI +QR+KA+L++RLK+PPPI+QF+QTLD+
Sbjct: 56 LIQRRPKNFGIGQNIQPKRNLYRFVKWPKYIELQRKKAILKKRLKIPPPIHQFSQTLDRN 115
Query: 357 TAKGLFKILEKYRP-ETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEK 533
+A +F ++ KY+P D+PTP +P T+RAG VT + +
Sbjct: 116 SANQIFNLVTKYQPLSKQAKKMLLVHRAQLRAEGKPDQPTPRKP-TVRAGIREVTTAITQ 174
Query: 534 KKAQLVVIAHD 566
KKA+LVVIAHD
Sbjct: 175 KKARLVVIAHD 185
>UniRef50_UPI0001552F1A Cluster: PREDICTED: similar to Ribosomal
protein L7a; n=4; Eutheria|Rep: PREDICTED: similar to
Ribosomal protein L7a - Mus musculus
Length = 246
Score = 134 bits (324), Expect = 1e-30
Identities = 72/130 (55%), Positives = 85/130 (65%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
LFEKR K+F GQDIQP RDL FV+WP+YIR+QRQ+A+L + LKVPP IN FTQ LD+
Sbjct: 31 LFEKRPKHFGTGQDIQPKRDLMCFVKWPRYIRLQRQRAILYKWLKVPPAINPFTQALDRQ 90
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
TA L K++ KYRPET + RP L+AG NTVT L+E K
Sbjct: 91 TATQLLKLVHKYRPET--------------------KQATKRPPVLQAGVNTVTTLMENK 130
Query: 537 KAQLVVIAHD 566
KAQLVVIAHD
Sbjct: 131 KAQLVVIAHD 140
>UniRef50_Q54ZD1 Cluster: 60S ribosomal protein L7a; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L7a
- Dictyostelium discoideum AX4
Length = 285
Score = 127 bits (307), Expect = 2e-28
Identities = 66/134 (49%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
L+ K KNF G +QP RDL+ F WP+YI++QRQ+ VL +RLKVPP INQFT+ DK
Sbjct: 46 LYTKNVKNFGTGFGVQPKRDLTHFTHWPRYIKLQRQRRVLLKRLKVPPTINQFTRVFDKN 105
Query: 357 TAKGLFKILEKYRPE---TXXXXXXXXXXXXXXXXXXXDEPTPTRP-NTLRAGTNTVTKL 524
TA LFK+L+KYRPE P +P LR G ++VTKL
Sbjct: 106 TAVHLFKLLDKYRPEEASVKKARLLKIAEARAATPKGQAAPKAEKPVQHLRFGIDSVTKL 165
Query: 525 VEKKKAQLVVIAHD 566
+EKKKA+LVVIAHD
Sbjct: 166 IEKKKAKLVVIAHD 179
>UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L7Ae containing protein - Tetrahymena
thermophila SB210
Length = 286
Score = 127 bits (306), Expect = 2e-28
Identities = 63/130 (48%), Positives = 82/130 (63%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
LF+ + ++F +G DIQP RDL+RFVRWP+YI +QRQK VL +RLKVPP I+QFT+TLDK
Sbjct: 120 LFQAKPRSFRVGGDIQPKRDLTRFVRWPRYITLQRQKRVLLQRLKVPPQIHQFTKTLDKN 179
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
+ LFK+L Y PE T +P L+ G N +T L+E K
Sbjct: 180 QSSNLFKLLASYAPEKPAEKKQRLVAQAEAKKDGKQVET-KKPIVLKYGLNHITTLIENK 238
Query: 537 KAQLVVIAHD 566
+A+LVVIAHD
Sbjct: 239 QAKLVVIAHD 248
>UniRef50_Q4VH13 Cluster: Rpl7A; n=2; Euglena gracilis|Rep: Rpl7A -
Euglena gracilis
Length = 295
Score = 127 bits (306), Expect = 2e-28
Identities = 62/130 (47%), Positives = 80/130 (61%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
LFE R KNF++GQD+QP RDLSRFVRWP YI+ QRQK +L +RL+VPP INQF T+D+
Sbjct: 63 LFESRPKNFSVGQDLQPKRDLSRFVRWPAYIKRQRQKRILLKRLRVPPAINQFNHTVDRH 122
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
K LFK KY+PE+ P + +G V +LVE+K
Sbjct: 123 LKKELFKFALKYKPESSFERRSRLKKEAEAKLKDPKAPASVPGPRVYSGAQRVFRLVEQK 182
Query: 537 KAQLVVIAHD 566
+A+LV+IAHD
Sbjct: 183 RAKLVLIAHD 192
>UniRef50_A7APX8 Cluster: Ribosomal protein L7Ae family protein;
n=1; Babesia bovis|Rep: Ribosomal protein L7Ae family
protein - Babesia bovis
Length = 269
Score = 127 bits (306), Expect = 2e-28
Identities = 65/130 (50%), Positives = 82/130 (63%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
LF KN+ IG DI+P +LSR+V+WPKY+RIQRQ+ VL +RLK+PP INQF T+DK+
Sbjct: 32 LFVHPPKNYGIGGDIRPRVNLSRYVKWPKYVRIQRQRRVLLQRLKIPPAINQFNYTIDKS 91
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
A L K+L KY+PET E +P L++G N VT LVE K
Sbjct: 92 QAHQLLKLLSKYKPET-RKEKSARLLADANAIAQGQEVVSKKPYMLKSGLNHVTNLVEYK 150
Query: 537 KAQLVVIAHD 566
KA+LVVIAHD
Sbjct: 151 KAKLVVIAHD 160
>UniRef50_Q3T2L9 Cluster: Rpl7A; n=2; Jakoba libera|Rep: Rpl7A -
Jakoba libera
Length = 250
Score = 122 bits (294), Expect = 6e-27
Identities = 62/126 (49%), Positives = 79/126 (62%)
Frame = +3
Query: 189 RTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKG 368
R KNF +G +QP RD++RFV+WPKYIR+QRQ+++L RRLKVPP I QF TLDK A
Sbjct: 58 RPKNFGLGGTVQPKRDVTRFVKWPKYIRLQRQRSILLRRLKVPPSIRQFRFTLDKNVATQ 117
Query: 369 LFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKKKAQL 548
L +L KY PET + + +P L+ G N +T LVE+KKA+L
Sbjct: 118 LITLLSKYSPET----KAEKSARLLAAAQEGEGSSKKKPFVLKFGLNHITTLVEQKKAKL 173
Query: 549 VVIAHD 566
VVIAHD
Sbjct: 174 VVIAHD 179
>UniRef50_Q75CI9 Cluster: ACL070Cp; n=31; Eukaryota|Rep: ACL070Cp -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 305
Score = 118 bits (284), Expect = 1e-25
Identities = 61/126 (48%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Frame = +3
Query: 195 KNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLF 374
+NF IGQ IQP R+LSR+V+WP+Y+R+QRQK +L RLKVPP I QF TLD+ TA F
Sbjct: 81 RNFGIGQAIQPKRNLSRYVKWPEYVRLQRQKKILSMRLKVPPTIAQFQHTLDRNTAAETF 140
Query: 375 KILEKYRPETXXXXXXXXXXXXXXXXXXXD--EPTPTRPNTLRAGTNTVTKLVEKKKAQL 548
K+ KYRPET E +P +P ++ G N V LVE KKA+L
Sbjct: 141 KLFNKYRPETAAEKKDRLATEAAAIAEGKTRMEASP-KPYAVKFGLNHVVSLVENKKAKL 199
Query: 549 VVIAHD 566
V+IA+D
Sbjct: 200 VLIAND 205
>UniRef50_P29453 Cluster: 60S ribosomal protein L8-B; n=55;
Eukaryota|Rep: 60S ribosomal protein L8-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 256
Score = 118 bits (283), Expect = 1e-25
Identities = 58/125 (46%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Frame = +3
Query: 195 KNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLF 374
KNF IGQ +QP R+LSR+V+WP+Y+R+QRQK +L RLKVPP I QF TLD+ TA F
Sbjct: 32 KNFGIGQAVQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVPPTIAQFQYTLDRNTAAETF 91
Query: 375 KILEKYRPETXXXXXXXXXXXXXXXXXXXD-EPTPTRPNTLRAGTNTVTKLVEKKKAQLV 551
K+ KYRPET + +P ++ G N V L+E KKA+LV
Sbjct: 92 KLFNKYRPETAAEKKERLTKEAAAIAEGKSKQDASPKPYAVKYGLNHVVSLIENKKAKLV 151
Query: 552 VIAHD 566
+IA+D
Sbjct: 152 LIAND 156
>UniRef50_Q6CQ17 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome E of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 327
Score = 117 bits (282), Expect = 2e-25
Identities = 61/132 (46%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
L + +NF IGQ IQP R+LSR+V+WP+Y+R+QRQK +L RLKVPP I QF TLD+
Sbjct: 97 LTKSSPRNFGIGQAIQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVPPSIAQFQNTLDRN 156
Query: 357 TAKGLFKILEKYRPET--XXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVE 530
TA FK+L+KY PET E +P +P ++ G N V L+E
Sbjct: 157 TAAETFKLLKKYSPETAAEKKERLTKEAAAIAEGKTKQEASP-KPYVVKYGLNHVVSLIE 215
Query: 531 KKKAQLVVIAHD 566
KKA+LV+IA+D
Sbjct: 216 NKKAKLVLIAND 227
>UniRef50_A0CSP0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=13; Alveolata|Rep: Chromosome
undetermined scaffold_26, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 340
Score = 116 bits (279), Expect = 4e-25
Identities = 60/130 (46%), Positives = 79/130 (60%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
LF K KNF IG D+QP RDLSR+VRWP+YI + RQK +L +R+KVP I+QF++TLDK
Sbjct: 106 LFVKDAKNFRIGNDVQPKRDLSRYVRWPRYILLHRQKKILLQRIKVPAAIHQFSRTLDKN 165
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
+ + +L+KY PET + + L+ G N VT LVE K
Sbjct: 166 QSSKVLGLLKKYSPET-KTEKKQRLTKLAEQKAQAQKTDSKKVQVLKFGLNHVTTLVETK 224
Query: 537 KAQLVVIAHD 566
KA+LVVIA+D
Sbjct: 225 KAKLVVIAYD 234
>UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L7a,
putative - Leishmania major
Length = 264
Score = 114 bits (275), Expect = 1e-24
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Frame = +3
Query: 180 FEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTT 359
F R KNF IGQD+ RDLSRF+RWP ++ +QR+K VLQRRLKVPP +NQFT+ LD+ +
Sbjct: 28 FAARPKNFGIGQDVPYARDLSRFMRWPTFVTMQRKKRVLQRRLKVPPALNQFTKVLDRAS 87
Query: 360 AKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTR-PNTLRAGTNTVTKLVEKK 536
K+++KY PET + T+ P + G VT+ +EKK
Sbjct: 88 RNEALKLIKKYAPETRKARRERLQKVAEEKKKDPKKTVSTKAPLAVVTGLQEVTRAIEKK 147
Query: 537 KAQLVVIAHD 566
+A++VVIA++
Sbjct: 148 QARMVVIANN 157
>UniRef50_Q9NBK2 Cluster: Ribosomal protein L7a; n=3;
Caenorhabditis|Rep: Ribosomal protein L7a -
Caenorhabditis briggsae
Length = 73
Score = 109 bits (263), Expect = 3e-23
Identities = 46/70 (65%), Positives = 59/70 (84%)
Frame = +3
Query: 195 KNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLF 374
+NF IGQDIQP RD++RFV+WPKYIR+QRQ A+LQ+RLK+PP INQF LD +A+ F
Sbjct: 1 RNFNIGQDIQPKRDVTRFVKWPKYIRLQRQSAILQKRLKIPPTINQFRTALDSQSARQAF 60
Query: 375 KILEKYRPET 404
K+L+KYRPE+
Sbjct: 61 KLLDKYRPES 70
>UniRef50_Q7RAN9 Cluster: 60S ribosomal protein L7a; n=7;
Plasmodium|Rep: 60S ribosomal protein L7a - Plasmodium
yoelii yoelii
Length = 318
Score = 105 bits (252), Expect = 7e-22
Identities = 50/130 (38%), Positives = 78/130 (60%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
+FE++ K+ IG I+P +DLS++V+WPK++R+QR+K +L +RLKVPP INQF TL K
Sbjct: 80 IFERKRKSNIIGVGIRPKKDLSKYVKWPKHLRLQRKKKILLQRLKVPPAINQFNYTLSKN 139
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
+ L L++Y+PE+ + +P ++ G +TKL+E+K
Sbjct: 140 QTQDLMNFLKEYKPESKSEKKERLLKKAKDDLNNA-QSKDKKPMMIKYGIKHITKLIERK 198
Query: 537 KAQLVVIAHD 566
LVVIA+D
Sbjct: 199 NCSLVVIAND 208
>UniRef50_UPI00005A55A3 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a; n=2; Eutheria|Rep: PREDICTED: similar to
60S ribosomal protein L7a - Canis familiaris
Length = 231
Score = 88.2 bits (209), Expect(2) = 2e-21
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
L EKR K F IGQDIQP RDL+RFV+WP YI++Q Q+A+L + L+VPP INQFTQ +
Sbjct: 69 LCEKRPKYFGIGQDIQPKRDLNRFVKWPHYIQLQLQRAILYKHLEVPPTINQFTQAFNSP 128
Query: 357 TAK 365
T K
Sbjct: 129 TRK 131
Score = 36.3 bits (80), Expect(2) = 2e-21
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +3
Query: 480 RPNTLRAGTNTVTKLVEKKKAQLVVIAH 563
R + L+AG NTVT LVE KKAQL +I H
Sbjct: 147 RLSVLQAGVNTVTILVETKKAQLGMITH 174
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 99 bits (238), Expect = 4e-20
Identities = 51/130 (39%), Positives = 70/130 (53%)
Frame = +3
Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
L R K+ IG+D+ +L+RFV+WP Y+R+QRQK +L +R+K+PP INQF DK
Sbjct: 30 LLAPRPKDIGIGRDLGAKMNLTRFVKWPVYVRLQRQKRILLKRVKIPPAINQFRIVADKP 89
Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
A + + L KY+PE ++L G N V K VE+K
Sbjct: 90 LAHSVVQFLAKYKPEDEQQKKERLRQAAKDKVEGKAATPKKSESSLIHGINEVVKAVERK 149
Query: 537 KAQLVVIAHD 566
+A LVVIAHD
Sbjct: 150 QASLVVIAHD 159
>UniRef50_UPI0001553583 Cluster: PREDICTED: similar to ribosomal
protein L7a; n=2; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L7a - Mus musculus
Length = 292
Score = 99.5 bits (237), Expect = 5e-20
Identities = 59/127 (46%), Positives = 72/127 (56%)
Frame = +3
Query: 186 KRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAK 365
KR KNF+ GQDIQP DL+RFV+ P YIR+QRQ+A L ++LKVPP IN F Q LD+ TA
Sbjct: 125 KRPKNFSTGQDIQPKCDLTRFVKRPCYIRLQRQRASLYKQLKVPPAINPFPQALDRQTAT 184
Query: 366 GLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKKKAQ 545
L ++ KYRPE + L G + VT L+E KKAQ
Sbjct: 185 KLLQLAHKYRPEA---------------------KQEKKQRLLAPGVSIVTTLMENKKAQ 223
Query: 546 LVVIAHD 566
L VI HD
Sbjct: 224 LGVIVHD 230
>UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=4;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L7a,
putative - Trichomonas vaginalis G3
Length = 244
Score = 97.5 bits (232), Expect = 2e-19
Identities = 51/126 (40%), Positives = 66/126 (52%)
Frame = +3
Query: 189 RTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKG 368
R ++ +++ D + V +P+Y+RIQRQ+ +L +RLKVPPP+N F+ TLDK A
Sbjct: 21 RQEHLFAQEEVASHVDTTAEVHFPQYVRIQRQRRILMKRLKVPPPVNHFSHTLDKNIAVQ 80
Query: 369 LFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKKKAQL 548
LFK LE YRPET L G VT VE KKAQL
Sbjct: 81 LFKFLEHYRPETKAEKNQRHKEEADKTKKDLKVAATCSKKALVQGIKNVTAAVESKKAQL 140
Query: 549 VVIAHD 566
V+IAHD
Sbjct: 141 VIIAHD 146
>UniRef50_A7U817 Cluster: Ribosomal protein L7A; n=9; Giardia
intestinalis|Rep: Ribosomal protein L7A - Giardia
lamblia (Giardia intestinalis)
Length = 163
Score = 93.1 bits (221), Expect = 4e-18
Identities = 44/111 (39%), Positives = 62/111 (55%)
Frame = +3
Query: 234 DLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXX 413
DL+ FVRWP+ +R+QRQKAVLQRRLKVPP +NQF + + +F + KY PE+
Sbjct: 27 DLTPFVRWPRQVRVQRQKAVLQRRLKVPPTVNQFMNPISRNLTNEIFNLARKYSPESKEE 86
Query: 414 XXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKKKAQLVVIAHD 566
P + + +G +T LVE K+A+LV+IA+D
Sbjct: 87 HKARLLQIADAKANGKPLPEKSNKLVIASGIRRITSLVENKRAKLVLIAND 137
>UniRef50_UPI0000499ADF Cluster: 60S ribosomal protein L7a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L7a - Entamoeba histolytica HM-1:IMSS
Length = 286
Score = 90.6 bits (215), Expect = 2e-17
Identities = 54/132 (40%), Positives = 75/132 (56%), Gaps = 8/132 (6%)
Frame = +3
Query: 195 KNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQF-TQTLDKTTAKGL 371
K F G P RDL+R+V++P Y+RIQ++K +L +RLK PP +N F TLDKT A L
Sbjct: 23 KVFGKGNVAHP-RDLTRYVKYPLYVRIQKEKRLLMKRLKTPPAVNIFANHTLDKTNATQL 81
Query: 372 FKILEKYRPE---TXXXXXXXXXXXXXXXXXXXDEPTPT----RPNTLRAGTNTVTKLVE 530
FKIL+ +PE ++ T + +P TL G N V +L+E
Sbjct: 82 FKILDHIKPEERAAKLQRIRAAAKELAEKTQKGEKATASKKTEKPATLSYGINNVVRLIE 141
Query: 531 KKKAQLVVIAHD 566
+K+A+LVVIAHD
Sbjct: 142 RKQAKLVVIAHD 153
>UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleus
barkhanus|Rep: Ribosomal protein L7A - Spironucleus
barkhanus
Length = 228
Score = 86.2 bits (204), Expect = 5e-16
Identities = 50/124 (40%), Positives = 67/124 (54%)
Frame = +3
Query: 195 KNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLF 374
K +G + +DL+R+VRWP YIRIQRQKA+LQ RLKVP INQF + K +
Sbjct: 17 KTSQMGVGVHTQKDLTRYVRWPAYIRIQRQKALLQTRLKVPGAINQFHHPVSKNLNIEIL 76
Query: 375 KILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKKKAQLVV 554
+KY ET P + + + +G N VT L+EKKKA+LV+
Sbjct: 77 NFAKKYIKET-----REERKVRITKMAETKTKIPAKASVI-SGINEVTNLIEKKKAKLVL 130
Query: 555 IAHD 566
IA+D
Sbjct: 131 IAND 134
>UniRef50_Q7TQ86 Cluster: Ac1158; n=8; Eumetazoa|Rep: Ac1158 -
Rattus norvegicus (Rat)
Length = 540
Score = 74.1 bits (174), Expect = 2e-12
Identities = 49/132 (37%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Frame = +3
Query: 180 FEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKV-------PPPINQFT 338
FEKR KNF I QDIQP RDL+RFV+W YIR+QRQ+A+L + K P P
Sbjct: 352 FEKRPKNFGIEQDIQPKRDLTRFVKWSCYIRLQRQRAILYKGSKYLLSSTSSPRPWTGRQ 411
Query: 339 QTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVT 518
+ + + + + R + + RP L+AG NTVT
Sbjct: 412 RLSCLSLPTSIGQRQSRRRSKGCWPVLRRKLLAKGTSQLRDHLSSTKRPPVLQAGVNTVT 471
Query: 519 KLVEKKKAQLVV 554
VE +KAQLVV
Sbjct: 472 TSVENQKAQLVV 483
>UniRef50_UPI000156049B Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 257
Score = 67.7 bits (158), Expect = 2e-10
Identities = 41/129 (31%), Positives = 66/129 (51%)
Frame = +2
Query: 182 REENKELCYWPGHPANQRSIPFRAMAEIYSHPASKGCVTASSQSAAANQPVHPDIR*NHS 361
REE +EL + GHPA P R MA ++ A++G ++Q A+ +QPVHP S
Sbjct: 23 REEAQELRHRTGHPAQTGPHPLRQMAPLHPAAATEGDPLXAAQGASRDQPVHPGPGPPDS 82
Query: 362 QRSVQDLGEIQARN*GSQERASKESRRSQGC*ER*ADTDKAKHPTRWNQHCYQAC*EEEG 541
+ Q ++QAR+ +E + +GC +R +A P+ Q+C+ E+EG
Sbjct: 83 YSAAQAGPQVQARDKAREEAEAAGPGXEEGCWQRGCPHXEATGPSSRGQYCHHLGGEQEG 142
Query: 542 TACGHRS*R 568
+A R+ R
Sbjct: 143 SAGSDRARR 151
>UniRef50_UPI0000DC13DB Cluster: UPI0000DC13DB related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC13DB UniRef100 entry -
Rattus norvegicus
Length = 200
Score = 59.3 bits (137), Expect = 6e-08
Identities = 39/106 (36%), Positives = 50/106 (47%)
Frame = +3
Query: 249 VRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXX 428
++WP Y +QRQ+ + K+ INQFT L+ L + K RP+T
Sbjct: 4 LKWPHYNWLQRQRVIPYMWFKISLEINQFTHALNWQIVIKLLMLARKSRPDTMQEKKRLL 63
Query: 429 XXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKKKAQLVVIAHD 566
D + RP RA NTV LVEKKKAQ+ VIAHD
Sbjct: 64 VHSEKKAADQGD-ISAKRPPIPRAEVNTVITLVEKKKAQM-VIAHD 107
>UniRef50_UPI000056487F Cluster: UPI000056487F related cluster; n=1;
Mus musculus|Rep: UPI000056487F UniRef100 entry - Mus
musculus
Length = 253
Score = 58.0 bits (134), Expect = 1e-07
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +3
Query: 186 KRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAK 365
K++ NF IG DIQ R L+ F+++ + ++ +L + K+P N FT LD+ A
Sbjct: 34 KKSPNFTIGLDIQHRRALTYFIKY-----LCEKRGILCEQFKIPT-FNYFTYALDQQIAT 87
Query: 366 GLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPT-RPNTLRAGTNTVTKLVEKKKA 542
+FK+ +YR E E P+ R + G N +T VE K+A
Sbjct: 88 QVFKLSYEYRLEKKQTRLLATARKRDDGK----EKVPSKRASAFPTGVNIITTFVENKRA 143
Query: 543 QLVVIAHD 566
QLVVIA +
Sbjct: 144 QLVVIAQE 151
>UniRef50_Q98RU4 Cluster: 60s ribosomal protein L7A; n=1; Guillardia
theta|Rep: 60s ribosomal protein L7A - Guillardia theta
(Cryptomonas phi)
Length = 206
Score = 54.4 bits (125), Expect = 2e-06
Identities = 33/112 (29%), Positives = 51/112 (45%)
Frame = +3
Query: 231 RDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXX 410
+D+ +F WPKYI IQRQ+ + ++K+P PI +FT+ L K LF L K +
Sbjct: 41 KDIYKFKIWPKYISIQRQRKIFSTKMKIPFPIFRFTKVLGKNLTDNLFSYLVKITFDLNK 100
Query: 411 XXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKKKAQLVVIAHD 566
+ G N +T +++KKK V+IA+D
Sbjct: 101 TKEVNSNGLNVDKI------------LIAHGINKITNMIKKKKLIFVIIAND 140
>UniRef50_UPI0000DA34B6 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a (Surfeit locus protein 3); n=1; Rattus
norvegicus|Rep: PREDICTED: similar to 60S ribosomal
protein L7a (Surfeit locus protein 3) - Rattus
norvegicus
Length = 156
Score = 48.4 bits (110), Expect = 1e-04
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Frame = +3
Query: 261 KYIRIQRQ----KAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXX 428
+YI++Q+Q + L ++LKVPP IN ++ LD TA L K+ K R E
Sbjct: 3 RYIQLQQQNNPPQKNLYKQLKVPPAINLLSEALDCETATQLLKVTHKCRAERKQEKQQRL 62
Query: 429 XXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKKKAQLVVIAHD 566
P G VT L E KKA L+VIAH+
Sbjct: 63 PAMLRRKLLAKGSSHSETP-AFPGGAFKVTNLAENKKALLLVIAHN 107
>UniRef50_Q07880 Cluster: Putative uncharacterized protein YLL044W
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YLL044W precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 148
Score = 47.6 bits (108), Expect = 2e-04
Identities = 32/98 (32%), Positives = 53/98 (54%)
Frame = -3
Query: 401 FWPVFLQDLEQTFGCGFI*CLGELVDWRRHFETTL*HSLLTLDANIFRPSHETG*ISGWL 222
FW V ++ LE + + EL + R+ ++ LL+L ++IF P +G +S WL
Sbjct: 39 FWSVLVEQLEGFSSGVSVQSVLELSNGWRNLQSDGQDLLLSLQSDIFWPFDVSGQVSLWL 98
Query: 221 DVLANSKVLCSLLE*RVYNLLGLNFLHHKWSGRYFFPY 108
D LAN++VL S + V +L+ L+ L +WS F +
Sbjct: 99 DSLANTEVLWSRVSQWVLSLVRLSGLSTEWSWSNFLTW 136
>UniRef50_UPI0000DC0A94 Cluster: UPI0000DC0A94 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0A94 UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 41.9 bits (94), Expect = 0.010
Identities = 44/130 (33%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
Frame = +3
Query: 180 FEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTT 359
FEK+ KN G DIQ RD FV+WP Y I+ +V +FT L + T
Sbjct: 19 FEKKPKNAYAGWDIQAKRD-CHFVKWPGY-SIEGPSSVRGS--------CRFTWALGQQT 68
Query: 360 AKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTL--RAGTNTVTKLVEK 533
A + RPE E + +P L + NTVT LVE
Sbjct: 69 ATRQLNLAHSDRPE----------------MNLAQEESHWQPKRLCPPSKVNTVTTLVEN 112
Query: 534 KKAQLVVIAH 563
KK QLVV+AH
Sbjct: 113 KKGQLVVVAH 122
>UniRef50_Q8SSG1 Cluster: 60S RIBOSOMAL PROTEIN L7A /yeast L8; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L7A
/yeast L8 - Encephalitozoon cuniculi
Length = 193
Score = 41.9 bits (94), Expect = 0.010
Identities = 27/96 (28%), Positives = 44/96 (45%)
Frame = +3
Query: 273 IQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXX 452
I+++ + L +++PP I QF L + K ++ KYRPE
Sbjct: 15 IKKKVSKLANSIRIPPAIYQFRTVLSEHDTKKFVELFMKYRPEN--------KQEKRIRL 66
Query: 453 XXXDEPTPTRPNTLRAGTNTVTKLVEKKKAQLVVIA 560
D +P ++ G VT L+E KKA+LV+I+
Sbjct: 67 QSEDPKKGPKPILVKFGLKHVTNLIETKKAKLVLIS 102
>UniRef50_Q1GKA5 Cluster: Transcriptional regulator TetR family;
n=1; Silicibacter sp. TM1040|Rep: Transcriptional
regulator TetR family - Silicibacter sp. (strain TM1040)
Length = 203
Score = 41.1 bits (92), Expect = 0.018
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +2
Query: 221 PANQRSIPFRAMAEIYSHPASKGCVTASSQSAAANQPVHPDIR*NHSQRSVQ 376
P + I + AM EIYS +KGC+ S +A A P HP+IR +QR VQ
Sbjct: 89 PEDALRIIYTAMLEIYSGAHAKGCLVFS--TAVAEAPAHPEIRARLAQRLVQ 138
>UniRef50_UPI0000DA4476 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a; n=4; Eutheria|Rep: PREDICTED: similar to
60S ribosomal protein L7a - Rattus norvegicus
Length = 246
Score = 39.5 bits (88), Expect = 0.054
Identities = 21/28 (75%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 486 NTLR-AGTNTVTKLVEKKKAQLVVIAHD 566
N LR AG NTV LVE KKAQLVV AHD
Sbjct: 113 NPLRKAGVNTVATLVENKKAQLVVTAHD 140
>UniRef50_Q6N1R6 Cluster: Transcriptional regulator, TetR family;
n=8; Alphaproteobacteria|Rep: Transcriptional regulator,
TetR family - Rhodopseudomonas palustris
Length = 226
Score = 32.3 bits (70), Expect = 8.1
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 212 PGH-PANQRSIPFRAMAEIYSHPASKGCVTASSQSAAANQPVHPDIR 349
PG PA I FR +A HP KGC + + AN P HP I+
Sbjct: 87 PGELPAKVEGI-FRNLARAARHPKWKGCGFLRTSAELANLPGHPAIK 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,712,558
Number of Sequences: 1657284
Number of extensions: 8975543
Number of successful extensions: 22711
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 22153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22679
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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