Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B21
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...   178   5e-45
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...   178   5e-45
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...   178   5e-45
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...   178   5e-45
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...   178   5e-45
BT029042-1|ABJ16975.1|  128|Drosophila melanogaster IP04527p pro...    29   3.3  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score =  178 bits (433), Expect = 5e-45
 Identities = 86/130 (66%), Positives = 99/130 (76%)
 Frame = +3

Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
           TA  LFK+LEKYRPE+                   D     +P+ + AGTNTVTKL+E+K
Sbjct: 96  TAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155

Query: 537 KAQLVVIAHD 566
           KAQLVVIAHD
Sbjct: 156 KAQLVVIAHD 165


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score =  178 bits (433), Expect = 5e-45
 Identities = 86/130 (66%), Positives = 99/130 (76%)
 Frame = +3

Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
           TA  LFK+LEKYRPE+                   D     +P+ + AGTNTVTKL+E+K
Sbjct: 96  TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155

Query: 537 KAQLVVIAHD 566
           KAQLVVIAHD
Sbjct: 156 KAQLVVIAHD 165


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score =  178 bits (433), Expect = 5e-45
 Identities = 86/130 (66%), Positives = 99/130 (76%)
 Frame = +3

Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
           TA  LFK+LEKYRPE+                   D     +P+ + AGTNTVTKL+E+K
Sbjct: 96  TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155

Query: 537 KAQLVVIAHD 566
           KAQLVVIAHD
Sbjct: 156 KAQLVVIAHD 165


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score =  178 bits (433), Expect = 5e-45
 Identities = 86/130 (66%), Positives = 99/130 (76%)
 Frame = +3

Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
           TA  LFK+LEKYRPE+                   D     +P+ + AGTNTVTKL+E+K
Sbjct: 96  TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155

Query: 537 KAQLVVIAHD 566
           KAQLVVIAHD
Sbjct: 156 KAQLVVIAHD 165


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score =  178 bits (433), Expect = 5e-45
 Identities = 86/130 (66%), Positives = 99/130 (76%)
 Frame = +3

Query: 177 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 356
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 357 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPTPTRPNTLRAGTNTVTKLVEKK 536
           TA  LFK+LEKYRPE+                   D     +P+ + AGTNTVTKL+E+K
Sbjct: 96  TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155

Query: 537 KAQLVVIAHD 566
           KAQLVVIAHD
Sbjct: 156 KAQLVVIAHD 165


>BT029042-1|ABJ16975.1|  128|Drosophila melanogaster IP04527p
           protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 518 GNSVGSSA*GVWPCRCRLIFLS 453
           GNS+ S +  +WPC C LI+LS
Sbjct: 24  GNSLRSFSDIIWPCCCHLIWLS 45


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,595,896
Number of Sequences: 53049
Number of extensions: 415857
Number of successful extensions: 941
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)