Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B19
         (383 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22CN6 Cluster: Protein kinase domain containing protei...    37   0.15 
UniRef50_Q4D106 Cluster: Putative uncharacterized protein; n=2; ...    31   7.5  

>UniRef50_Q22CN6 Cluster: Protein kinase domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
           domain containing protein - Tetrahymena thermophila
           SB210
          Length = 710

 Score = 36.7 bits (81), Expect = 0.15
 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = -2

Query: 277 HDIDCQIRKFNELKENDCYMTDRD-PAKNSQLY*TTTNSTAFKHPRT 140
           H   C I+KFN+LK+N+ Y+ + +  ++NS  Y    N TA K+ +T
Sbjct: 222 HKTSCDIQKFNQLKKNNNYIQNIECKSQNSSSYVNKKNITATKNNKT 268


>UniRef50_Q4D106 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 2144

 Score = 31.1 bits (67), Expect = 7.5
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = -2

Query: 364 LKYICYALSSIINLQQIK*TISHKAPPRLHDIDCQIRKFNELKENDCYMTDRDPAKNS 191
           L ++   LS+++   +++  +S  +PPRL + +C +   +EL    C+ + R  A+ S
Sbjct: 636 LLFMTQILSAVVLHLRVEQCLS-TSPPRLEEAECFVNSEDELSITSCFFSCRQGARES 692


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,339,711
Number of Sequences: 1657284
Number of extensions: 6274143
Number of successful extensions: 10590
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10589
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)