Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B18
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 247 4e-66
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 247 4e-66
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 247 4e-66
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 247 4e-66
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 221 3e-58
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 220 5e-58
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 220 5e-58
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 219 1e-57
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 219 1e-57
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 219 1e-57
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 214 3e-56
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 214 3e-56
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 199 9e-52
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 197 3e-51
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 188 2e-48
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 177 3e-45
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 112 1e-25
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 110 6e-25
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 110 6e-25
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 108 2e-24
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 108 2e-24
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 107 3e-24
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 93 9e-20
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 93 9e-20
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 60 1e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 60 1e-09
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 1.7
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 29 1.7
AF068709-17|AAC19257.2| 287|Caenorhabditis elegans Serpentine r... 29 2.3
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 3.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 3.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 3.9
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 5.2
U40028-7|AAA81118.1| 155|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z72502-2|CAA96588.1| 423|Caenorhabditis elegans Hypothetical pr... 27 6.9
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 6.9
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 6.9
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 6.9
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 27 6.9
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 9.1
AC024753-6|AAF60458.2| 407|Caenorhabditis elegans Hypothetical ... 27 9.1
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 247 bits (604), Expect = 4e-66
Identities = 113/157 (71%), Positives = 127/157 (80%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+H+GQAGVQ L IQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV
Sbjct: 7 IHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAV 66
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LA
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 126
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
D CTGLQGFL+FHS+ MERLSVDYGK
Sbjct: 127 DNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 163
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 247 bits (604), Expect = 4e-66
Identities = 113/157 (71%), Positives = 127/157 (80%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+H+GQAGVQ L IQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV
Sbjct: 6 IHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAV 65
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LA
Sbjct: 66 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 125
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
D CTGLQGFL+FHS+ MERLSVDYGK
Sbjct: 126 DNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 162
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 247 bits (604), Expect = 4e-66
Identities = 113/157 (71%), Positives = 127/157 (80%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+H+GQAGVQ L IQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV
Sbjct: 7 IHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAV 66
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LA
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 126
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
D CTGLQGFL+FHS+ MERLSVDYGK
Sbjct: 127 DNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 163
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 247 bits (604), Expect = 4e-66
Identities = 113/157 (71%), Positives = 127/157 (80%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+H+GQAGVQ L IQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV
Sbjct: 7 IHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAV 66
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LA
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 126
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
D CTGLQGFL+FHS+ MERLSVDYGK
Sbjct: 127 DNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 163
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 221 bits (539), Expect = 3e-58
Identities = 101/157 (64%), Positives = 119/157 (75%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+HVGQAGVQ L IQPDG + + ++G DDSFNTFFSET AGKHVPRA+
Sbjct: 12 IHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAI 71
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+DR+R+L
Sbjct: 72 MVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLV 131
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
+ C GLQGFL+FHS+ MERLSVDYGK
Sbjct: 132 ENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGK 168
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 220 bits (537), Expect = 5e-58
Identities = 102/157 (64%), Positives = 121/157 (77%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+HVGQAGVQ L IQPDG MPT T G +SF TFFS+TG+G++VPR++
Sbjct: 7 IHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSI 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LA
Sbjct: 65 FVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLA 124
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
D C+GLQGF +FHS+ MERLSVDYGK
Sbjct: 125 DNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 220 bits (537), Expect = 5e-58
Identities = 102/157 (64%), Positives = 121/157 (77%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+HVGQAGVQ L IQPDG MPT T G +SF TFFS+TG+G++VPR++
Sbjct: 7 IHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSI 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LA
Sbjct: 65 FVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLA 124
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
D C+GLQGF +FHS+ MERLSVDYGK
Sbjct: 125 DNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 219 bits (534), Expect = 1e-57
Identities = 101/157 (64%), Positives = 121/157 (77%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+HVGQAGVQ L IQPDG MP+D+ G +SF TFFS+TG G++VPR++
Sbjct: 7 IHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSI 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LA
Sbjct: 65 FVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLA 124
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
D C+GLQGF +FHS+ MERLSVDYGK
Sbjct: 125 DNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 219 bits (534), Expect = 1e-57
Identities = 100/157 (63%), Positives = 119/157 (75%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+H+GQAGVQ L I PDG MP D + G D S+NTFFSET +GKHVPRA+
Sbjct: 7 IHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAI 66
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+DR+R+L
Sbjct: 67 FVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLT 126
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
++C LQGFLIFHS+ MERLS+DYGK
Sbjct: 127 ERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGK 163
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 219 bits (534), Expect = 1e-57
Identities = 101/157 (64%), Positives = 121/157 (77%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+HVGQAGVQ L IQPDG MP+D+ G +SF TFFS+TG G++VPR++
Sbjct: 7 IHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSI 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LA
Sbjct: 65 FVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLA 124
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
D C+GLQGF +FHS+ MERLSVDYGK
Sbjct: 125 DNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 214 bits (522), Expect = 3e-56
Identities = 99/157 (63%), Positives = 119/157 (75%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+HVGQAGVQ L IQPDG MP+++ GG SF TFFS+TG G++VPR++
Sbjct: 7 IHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSI 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+LA
Sbjct: 65 FVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLA 124
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
D C+GLQGF +FHS+ MERLSVDYGK
Sbjct: 125 DNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 214 bits (522), Expect = 3e-56
Identities = 99/157 (63%), Positives = 119/157 (75%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+HVGQAGVQ L IQPDG MP+++ GG SF TFFS+TG G++VPR++
Sbjct: 7 IHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSI 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+LA
Sbjct: 65 FVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLA 124
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
D C+GLQGF +FHS+ MERLSVDYGK
Sbjct: 125 DNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 199 bits (485), Expect = 9e-52
Identities = 93/157 (59%), Positives = 112/157 (71%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+HVGQAGVQ L IQPDG D T ++ NTFF+ET GKHVPR +
Sbjct: 13 IHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCL 72
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA
Sbjct: 73 FVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLA 132
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
+ C GLQGF+IFHS+ MERLS +YGK
Sbjct: 133 ENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGK 169
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 197 bits (481), Expect = 3e-51
Identities = 93/157 (59%), Positives = 110/157 (70%), Gaps = 1/157 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
+HVGQAGVQ L I PDG T G S TFFS+TG G+HVPR++
Sbjct: 7 IHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGRHVPRSI 63
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LDRIR+LA
Sbjct: 64 FVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLA 123
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
+ C GLQGF +FHS+ MERLS +YGK
Sbjct: 124 NNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGK 160
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 188 bits (458), Expect = 2e-48
Identities = 84/134 (62%), Positives = 102/134 (76%)
Frame = +2
Query: 74 IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHP 253
IQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGTYR LFHP
Sbjct: 8 IQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHP 67
Query: 254 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSYXXXXXXXX 433
EQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFHS+
Sbjct: 68 EQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGF 127
Query: 434 XXXXMERLSVDYGK 475
MERLS +YGK
Sbjct: 128 LSLLMERLSTEYGK 141
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 177 bits (431), Expect = 3e-45
Identities = 81/156 (51%), Positives = 102/156 (65%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTRIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 187
+H+GQAG Q + + ++ S FFSE+ GKHVPRA++
Sbjct: 11 IHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHVPRAIY 70
Query: 188 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 367
VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDRIRK +
Sbjct: 71 VDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTE 130
Query: 368 QCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
C GLQGFL+FHS+ MERLSV++GK
Sbjct: 131 NCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGK 166
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 112 bits (270), Expect = 1e-25
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
V GQ G Q I+ IQPDG + + + N +++E GK+VPRAV
Sbjct: 7 VQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGKYVPRAV 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDY 469
+ C LQGF + HS + ++ +Y
Sbjct: 125 EGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 110 bits (264), Expect = 6e-25
Identities = 59/134 (44%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
V GQ G Q I+ IQPDG + + + + +++E GK+VPRAV
Sbjct: 7 VQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGKYVPRAV 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IRK A
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEA 124
Query: 365 DQCTGLQGFLIFHS 406
+ C LQGF + HS
Sbjct: 125 EGCDCLQGFQLTHS 138
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 110 bits (264), Expect = 6e-25
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
V GQ G Q I+ IQPDG + + + + +++E GK+VPRAV
Sbjct: 7 VQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGKYVPRAV 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IRK A
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEA 124
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDY 469
+ C LQGF + HS + ++ +Y
Sbjct: 125 EGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 108 bits (259), Expect = 2e-24
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Frame = +2
Query: 95 PTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 265
P+ + +G D + N +++E G+ K+VPRAV VDLEP +D VR+G + QLF P+ +
Sbjct: 32 PSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYV 91
Query: 266 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSYXXXXXXXXXXXX 445
G+ A NN+A+GHYT G E+VD VLD +RK A+ LQGF + HS
Sbjct: 92 FGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLL 151
Query: 446 MERLSVDY 469
+ ++ +Y
Sbjct: 152 ISKIREEY 159
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 108 bits (259), Expect = 2e-24
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Frame = +2
Query: 95 PTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 265
P+ + +G D + N +++E G+ K+VPRAV VDLEP +D VR+G + QLF P+ +
Sbjct: 32 PSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYV 91
Query: 266 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSYXXXXXXXXXXXX 445
G+ A NN+A+GHYT G E+VD VLD +RK A+ LQGF + HS
Sbjct: 92 FGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLL 151
Query: 446 MERLSVDY 469
+ ++ +Y
Sbjct: 152 ISKIREEY 159
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 107 bits (258), Expect = 3e-24
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Frame = +2
Query: 95 PTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 265
PT G D + N +++E GK+VPRA VDLEP +D VR G + QLF P+ +
Sbjct: 32 PTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFV 91
Query: 266 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSYXXXXXXXXXXXX 445
G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQGF + HS
Sbjct: 92 FGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLL 151
Query: 446 MERLSVDY 469
+ ++ +Y
Sbjct: 152 ISKIREEY 159
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 93.1 bits (221), Expect = 9e-20
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
V VGQ G Q I+ +Q DG D G + +++ E K+VPRA+
Sbjct: 7 VQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAI 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR+ A
Sbjct: 65 LVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREA 124
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDY 469
+ L+GF + HS + +L +Y
Sbjct: 125 EAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEY 159
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 93.1 bits (221), Expect = 9e-20
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = +2
Query: 8 VHVGQAGVQSEMPAGSCIALTR-IQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
V VGQ G Q I+ +Q DG D G + +++ E K+VPRA+
Sbjct: 7 VQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAI 64
Query: 185 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 364
VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR+ A
Sbjct: 65 LVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREA 124
Query: 365 DQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDY 469
+ L+GF + HS + +L +Y
Sbjct: 125 EAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEY 159
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 59.7 bits (138), Expect = 1e-09
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Frame = +2
Query: 8 VHVGQAGVQ-SEMPAGSCIALTRIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
VHVGQ G Q ++ S + I GQ + + +D + F + +VPRAV
Sbjct: 10 VHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAV 66
Query: 185 FVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIR 355
VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D I
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIII 125
Query: 356 KLADQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
+ A+ L G L HS +ERL + K
Sbjct: 126 REAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPK 165
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 59.7 bits (138), Expect = 1e-09
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Frame = +2
Query: 8 VHVGQAGVQ-SEMPAGSCIALTRIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 184
VHVGQ G Q ++ S + I GQ + + +D + F + +VPRAV
Sbjct: 10 VHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAV 66
Query: 185 FVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIR 355
VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D I
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIII 125
Query: 356 KLADQCTGLQGFLIFHSYXXXXXXXXXXXXMERLSVDYGK 475
+ A+ L G L HS +ERL + K
Sbjct: 126 REAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPK 165
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 72 GSNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNP 203
G + +RC L RP G T P+ A+ S+ P S L+P
Sbjct: 712 GESTCLRCGLCRPCGEVTEPAQPGRAQHVQFSSTAAPQRSTLHP 755
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 72 GSNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNP 203
G + +RC L RP G T P+ A+ S+ P S L+P
Sbjct: 712 GESTCLRCGLCRPCGEVTEPAQPGRAQHVQFSSTAAPQRSTLHP 755
>AF068709-17|AAC19257.2| 287|Caenorhabditis elegans Serpentine
receptor, class x protein24 protein.
Length = 287
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -1
Query: 319 SNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGF 197
S G++T ++ VC I++ LF++ + + S+ LV+ S F
Sbjct: 38 SFGIITKNLAVCNIVMCGLGLFFLFPMQLAPSSVLVDNSHF 78
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 206 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 206 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 206 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 206 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 206 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 206 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 206 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 206 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 5.2
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +3
Query: 111 SGVETTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT 290
SG+ TPS SSA + +T P +S P L ++ + N + +P
Sbjct: 944 SGLSQTPSDSSSASDSMRTTTVDPDASTETPYDFVLENLTWNETVYYSENPFYITPIPNK 1003
Query: 291 TMLVVTTPL 317
+TT +
Sbjct: 1004 EPGALTTAM 1012
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 5.2
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +3
Query: 111 SGVETTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT 290
SG+ TPS SSA + +T P +S P L ++ + N + +P
Sbjct: 944 SGLSQTPSDSSSASDSMRTTTVDPDASTETPYDFVLENLTWNETVYYSENPFYITPIPNK 1003
Query: 291 TMLVVTTPL 317
+TT +
Sbjct: 1004 EPGALTTAM 1012
>U40028-7|AAA81118.1| 155|Caenorhabditis elegans Hypothetical
protein T05A7.3 protein.
Length = 155
Score = 27.5 bits (58), Expect = 5.2
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +3
Query: 102 TRPSGVETTP--STRSSARPELASTFPVPSSSI--LNPL*LTRSALAHTDSCFIQNNLSL 269
T PSG +T + P STFP+PS + L L R + +D QN+ L
Sbjct: 46 TNPSGCNSTALFDAGTITSPNYPSTFPIPSYCVYKLTTLGAYRIGIYFSDLSMSQNSYVL 105
Query: 270 V 272
V
Sbjct: 106 V 106
>Z72502-2|CAA96588.1| 423|Caenorhabditis elegans Hypothetical
protein C08B6.5 protein.
Length = 423
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 113 RWSCQLASDHQVGSVSRQYSSQQAFPIGLRLGQRV 9
R++C L D +VGS Y+S GL L QRV
Sbjct: 130 RFACALYWDSRVGSKFNIYTSSVLETFGLMLKQRV 164
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 137 TFFSETGAGKHVPRAVFVDLEPTVVD 214
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 137 TFFSETGAGKHVPRAVFVDLEPTVVD 214
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 137 TFFSETGAGKHVPRAVFVDLEPTVVD 214
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 102 TRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDS 242
T P + T + +PE+A+T P PS++ PL +A TD+
Sbjct: 182 TTPRAIPPAVVTTEATQPEVATTLPEPSTT-SEPLTSAPRMVATTDA 227
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 86 GQMPTDKTIGGGDDSFNTFFSE-TGAGKHVPRAVFVDLEPTVVDEVRTGT 232
GQMPTDK + S NT +S+ T A + + + P+ V V T
Sbjct: 156 GQMPTDKNVNSVITSDNTTYSDVTTAPQACDKTIIQSDCPSTVAPVTCST 205
>AC024753-6|AAF60458.2| 407|Caenorhabditis elegans Hypothetical
protein Y23H5B.4 protein.
Length = 407
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/69 (21%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -1
Query: 340 DQVYDFLSNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLA 161
+ V+D LS + V+C ++ + +++ VC N+SG I++ ++L+
Sbjct: 313 NNVFDLLSLINSAVNFVLCALMSHVFRREFLQTFGVCCPQSSENHSGAPINKTSNRSILS 372
Query: 160 S-SGLAEER 137
+ S +A+ +
Sbjct: 373 TFSNIAKPK 381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,114,863
Number of Sequences: 27780
Number of extensions: 292072
Number of successful extensions: 950
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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