Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B17
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    58   3e-11
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   2.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   2.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.1  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 58.4 bits (135), Expect = 3e-11
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
 Frame = +3

Query: 126 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISI 305
           + +F+   L+  LL  +   G+ KP+AIQ+ AI   +  RD+++ AQ+G+GKTA F + I
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPI 216

Query: 306 LQQIAT------SIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 452
           +  + +      +   C     +I++PTRELA QI         +   K     GGT+
Sbjct: 217 IHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYNSTVKVAVIYGGTS 274


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 384 QKVVIALGDHLNAKCHAC 437
           +K  IAL D  N  CH C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 423 WHSNDHQELSPPSGFVAP 370
           WH+     LSP +GF +P
Sbjct: 188 WHTPSMYPLSPGAGFRSP 205


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 423 WHSNDHQELSPPSGFVAP 370
           WH+     LSP +GF +P
Sbjct: 80  WHTPSMYPLSPGAGFRSP 97


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = +3

Query: 312 QIATSIRECQALILAPTRELAQQIQKVVIALGDHL 416
           Q A+++R C+ + LA   + +  ++  +I   +HL
Sbjct: 158 QDASNVRNCELVGLADLNQGSDYVRSKIIEYMNHL 192


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = +3

Query: 312 QIATSIRECQALILAPTRELAQQIQKVVIALGDHL 416
           Q A+++R C+ + LA   + +  ++  +I   +HL
Sbjct: 159 QDASNVRNCELVGLADLNQGSDYVRSKIIEYMNHL 193


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = +3

Query: 312 QIATSIRECQALILAPTRELAQQIQKVVIALGDHL 416
           Q A+++R C+ + LA   + +  ++  +I   +HL
Sbjct: 159 QDASNVRNCELVGLADLNQGSDYVRSKIIEYMNHL 193


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 168 GAIPPSNSYHQRFPPLD 118
           G  PP    + RFPP D
Sbjct: 71  GGQPPQGMPYPRFPPYD 87


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 33  DSKNGPSKDQVYDGPPGMEPGGALDTNWD 119
           DS+  P +D V   PP  EP    + ++D
Sbjct: 76  DSRRLPLRDAVEKRPPPDEPIDDYEPSFD 104


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 443 TNACMAFGIQMITKSYHHLLDLLRQLSSWS 354
           T+ C  F    ITK    ++ +  QL  WS
Sbjct: 523 TSICKNFCFGFITKQLIFMIFVTYQLYCWS 552


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,711
Number of Sequences: 336
Number of extensions: 1904
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)