Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B17
(454 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 177 3e-45
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 177 3e-45
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 173 5e-44
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 173 5e-44
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 97 4e-21
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 92 1e-19
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 73 1e-13
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 73 1e-13
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 71 3e-13
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 71 3e-13
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 71 3e-13
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 71 3e-13
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 71 3e-13
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 69 2e-12
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 69 2e-12
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 66 9e-12
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 66 9e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 65 2e-11
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 61 3e-10
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 59 1e-09
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 55 3e-08
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 54 6e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 54 6e-08
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 54 6e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 54 6e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 53 8e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 53 8e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 53 8e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 51 3e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 51 3e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 51 3e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 51 5e-07
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 51 5e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 50 6e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 49 1e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 48 2e-06
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 47 6e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 47 6e-06
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 44 4e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 44 4e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 44 7e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 44 7e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 39 0.001
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.056
U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to i... 32 0.22
U00047-12|AAA50685.1| 332|Caenorhabditis elegans Nuclear hormon... 31 0.30
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 31 0.39
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 31 0.39
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 31 0.39
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 29 1.2
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 1.6
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 29 2.1
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 2.1
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 28 2.8
Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical pr... 27 6.4
U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein. 27 6.4
AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical... 27 6.4
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 27 6.4
Z78201-2|CAB01588.1| 324|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 8.4
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 27 8.4
U40935-6|AAL02505.1| 102|Caenorhabditis elegans Hypothetical pr... 27 8.4
U40935-5|AAM29686.1| 441|Caenorhabditis elegans Hypothetical pr... 27 8.4
U40935-4|AAM29687.1| 436|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF465981-1|AAL76993.1| 324|Caenorhabditis elegans cuticle colla... 27 8.4
AF262406-1|AAL08218.1| 324|Caenorhabditis elegans cuticle colla... 27 8.4
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 177 bits (431), Expect = 3e-45
Identities = 83/110 (75%), Positives = 97/110 (88%)
Frame = +3
Query: 123 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSIS 302
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 303 ILQQIATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 452
+LQ + T +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTN 133
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 177 bits (431), Expect = 3e-45
Identities = 83/110 (75%), Positives = 97/110 (88%)
Frame = +3
Query: 123 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSIS 302
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 303 ILQQIATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 452
+LQ + T +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTN 133
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 173 bits (421), Expect = 5e-44
Identities = 83/123 (67%), Positives = 101/123 (82%)
Frame = +3
Query: 84 MEPGGALDTNWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQA 263
++ G ++ N+DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC +DVIAQA
Sbjct: 14 VDADGLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQA 73
Query: 264 QSGTGKTATFSISILQQIATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 443
QSGTGKTATFS+SILQ+I QAL++APTRELAQQIQKV+ ALG++LN CIG
Sbjct: 74 QSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIG 133
Query: 444 GTN 452
GT+
Sbjct: 134 GTS 136
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 173 bits (421), Expect = 5e-44
Identities = 83/123 (67%), Positives = 101/123 (82%)
Frame = +3
Query: 84 MEPGGALDTNWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQA 263
++ G ++ N+DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC +DVIAQA
Sbjct: 14 VDADGLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQA 73
Query: 264 QSGTGKTATFSISILQQIATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 443
QSGTGKTATFS+SILQ+I QAL++APTRELAQQIQKV+ ALG++LN CIG
Sbjct: 74 QSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIG 133
Query: 444 GTN 452
GT+
Sbjct: 134 GTS 136
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 97.5 bits (232), Expect = 4e-21
Identities = 49/100 (49%), Positives = 65/100 (65%)
Frame = +3
Query: 144 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQIAT 323
M LKEELLRGIY +GFEKPSAIQ+ A+ PC +DV Q+Q+G+GKT I ILQ I
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 324 SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 443
Q ++LAP R +AQ+ + + +LG +LN C+G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLG 99
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 92.3 bits (219), Expect = 1e-19
Identities = 40/106 (37%), Positives = 69/106 (65%)
Frame = +3
Query: 135 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQ 314
F+D L +LL GI+ G+EKPS IQ+ +I + +D++A+A++GTGKT + I ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 315 IATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 452
I +++ QA+++ PTRELA Q ++ + L H+ K GGT+
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTD 150
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 75.4 bits (177), Expect = 2e-14
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Frame = +3
Query: 126 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQW--RDVIAQAQSGTGKTATFSI 299
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 300 SILQQIATSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 452
++L +I ++ Q + LAPT ELA+QI +VV +G + N K H I G N
Sbjct: 268 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGN 319
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 75.4 bits (177), Expect = 2e-14
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Frame = +3
Query: 126 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQW--RDVIAQAQSGTGKTATFSI 299
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 300 SILQQIATSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 452
++L +I ++ Q + LAPT ELA+QI +VV +G + N K H I G N
Sbjct: 293 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGN 344
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 75.4 bits (177), Expect = 2e-14
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Frame = +3
Query: 126 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQW--RDVIAQAQSGTGKTATFSI 299
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 300 SILQQIATSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 452
++L +I ++ Q + LAPT ELA+QI +VV +G + N K H I G N
Sbjct: 677 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGN 728
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 72.9 bits (171), Expect = 1e-13
Identities = 40/116 (34%), Positives = 62/116 (53%)
Frame = +3
Query: 105 DTNWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKT 284
D D ++F ++ + + L G+ KPS IQQ A+ +Q +DVI A++G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 285 ATFSISILQQIATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 452
F+I +LQ + + L+L PTRELA QI + ALG + +GG +
Sbjct: 96 GAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVD 151
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 72.5 bits (170), Expect = 1e-13
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Frame = +3
Query: 30 EDSKNGPSK--DQVYDGPPGMEPGGALDTNWDQVVETFDDMNLKEELLRGIYAYGFEKPS 203
E K+G SK + D + G +LDT+ V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 204 AIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQIATSIR--EC-QALILAPTRELA 374
IQQ I + +D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA
Sbjct: 173 PIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELA 232
Query: 375 QQIQKVVIALGDHLNAKCHACIGG 446
Q+ +V L + + C GG
Sbjct: 233 IQVFQVFRKLSTFIQLEVCLCAGG 256
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 71.3 bits (167), Expect = 3e-13
Identities = 40/85 (47%), Positives = 48/85 (56%)
Frame = +3
Query: 135 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQ 314
F D LK E+LR I GFE PS +Q I I DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 315 IATSIRECQALILAPTRELAQQIQK 389
+ E + + TRELA QI K
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISK 127
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 71.3 bits (167), Expect = 3e-13
Identities = 40/85 (47%), Positives = 48/85 (56%)
Frame = +3
Query: 135 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQ 314
F D LK E+LR I GFE PS +Q I I DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 315 IATSIRECQALILAPTRELAQQIQK 389
+ E + + TRELA QI K
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISK 127
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 71.3 bits (167), Expect = 3e-13
Identities = 40/85 (47%), Positives = 48/85 (56%)
Frame = +3
Query: 135 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQ 314
F D LK E+LR I GFE PS +Q I I DV+ QA+SG GKTA F I+ LQQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 315 IATSIRECQALILAPTRELAQQIQK 389
+ E + + TRELA QI K
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQISK 126
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 71.3 bits (167), Expect = 3e-13
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Frame = +3
Query: 135 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-WRDVIAQAQSGTGKTATFSISILQ 311
+ + L + + I GF +P+ IQ++ I PCI +DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 312 QI-ATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 446
++ +AL+++PTRELA Q KVV LG +C +GG
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 71.3 bits (167), Expect = 3e-13
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Frame = +3
Query: 135 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-WRDVIAQAQSGTGKTATFSISILQ 311
+ + L + + I GF +P+ IQ++ I PCI +DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 312 QI-ATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 446
++ +AL+++PTRELA Q KVV LG +C +GG
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 68.9 bits (161), Expect = 2e-12
Identities = 41/147 (27%), Positives = 68/147 (46%)
Frame = +3
Query: 6 EGRSEDWPEDSKNGPSKDQVYDGPPGMEPGGALDTNWDQVVETFDDMNLKEELLRGIYAY 185
E + D E+ G D+ +P + N + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTPKPIQISEDN--MTTKKFSQLGVCSWITQQLQTM 107
Query: 186 GFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQIATSIRECQALILAPTR 365
+ + +Q I ++ D++ A++GTGKT F+I ILQ+++ ALIL PTR
Sbjct: 108 QIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTR 167
Query: 366 ELAQQIQKVVIALGDHLNAKCHACIGG 446
ELA QI + ALG + KC +GG
Sbjct: 168 ELAFQIAEQFTALGKPITLKCSVIVGG 194
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 68.9 bits (161), Expect = 2e-12
Identities = 41/147 (27%), Positives = 68/147 (46%)
Frame = +3
Query: 6 EGRSEDWPEDSKNGPSKDQVYDGPPGMEPGGALDTNWDQVVETFDDMNLKEELLRGIYAY 185
E + D E+ G D+ +P + N + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTPKPIQISEDN--MTTKKFSQLGVCSWITQQLQTM 107
Query: 186 GFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQIATSIRECQALILAPTR 365
+ + +Q I ++ D++ A++GTGKT F+I ILQ+++ ALIL PTR
Sbjct: 108 QIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTR 167
Query: 366 ELAQQIQKVVIALGDHLNAKCHACIGG 446
ELA QI + ALG + KC +GG
Sbjct: 168 ELAFQIAEQFTALGKPITLKCSVIVGG 194
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 66.5 bits (155), Expect = 9e-12
Identities = 34/106 (32%), Positives = 62/106 (58%)
Frame = +3
Query: 132 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQ 311
TF+ + + ++ L + F++PS +Q RAI + RD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 312 QIATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 449
+ + Q +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGS 127
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 66.5 bits (155), Expect = 9e-12
Identities = 34/106 (32%), Positives = 62/106 (58%)
Frame = +3
Query: 132 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQ 311
TF+ + + ++ L + F++PS +Q RAI + RD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 312 QIATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 449
+ + Q +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGS 127
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 65.3 bits (152), Expect = 2e-11
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 10/119 (8%)
Frame = +3
Query: 126 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISI 305
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 306 LQQIATSIRECQ----------ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 452
L I TS+ + + A+I+APTRELAQQI++ G L K + IGG +
Sbjct: 360 LVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGAS 417
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 61.3 bits (142), Expect = 3e-10
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Frame = +3
Query: 129 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISIL 308
+TF D L E +L+ I G+EK + +Q+ I ++ ++++ +A++G+GKT F I ++
Sbjct: 89 KTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLV 148
Query: 309 QQIATSIRE------CQALILAPTRELAQQIQKVVIALGDHL 416
Q++ + A+I+APT+EL QI K+ + L L
Sbjct: 149 QKLIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQAL 190
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 59.3 bits (137), Expect = 1e-09
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 135 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQ 314
F+D L L G+ + KP+ IQ+ I + DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 315 IATSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 452
+ + ALI++PTRELA Q + A+G H C IGG++
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSD 187
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 55.6 bits (128), Expect = 2e-08
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Frame = +3
Query: 183 YG-FEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQIATSIRECQA----- 344
YG F+KP+ IQ + + RD+I+ A++G+GKT F + L I +
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 345 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 452
L+L PTRELAQQ+Q+V I L K GG +
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGAS 241
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Frame = +3
Query: 150 LKEELLRGIYAYGFEKPSAIQQRAIMPCIQWR-DVIAQAQSGTGKTATFSISILQQI--- 317
L E+L I GF +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES 221
Query: 318 --------ATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 446
+T +R +ALI+APTREL QI K + AL + +GG
Sbjct: 222 SDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 272
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 54.8 bits (126), Expect = 3e-08
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Frame = +3
Query: 126 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISI 305
++T+ + +++ + + + KP++IQ +AI + RDVI A++G+GKT F + +
Sbjct: 303 IKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPM 362
Query: 306 LQQI--ATSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 446
+ I + E A+ILAPTRELA Q K L K GG
Sbjct: 363 FRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGG 414
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.6 bits (123), Expect = 6e-08
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = +3
Query: 129 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISIL 308
+TF + NL E + + + G+ K + IQQ A+ Q D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 309 QQI-------ATSIREC--QALILAPTRELAQQI 383
++ C + +IL PTRELA QI
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.6 bits (123), Expect = 6e-08
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = +3
Query: 129 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISIL 308
+TF + NL E + + + G+ K + IQQ A+ Q D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 309 QQI-------ATSIREC--QALILAPTRELAQQI 383
++ C + +IL PTRELA QI
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 53.6 bits (123), Expect = 6e-08
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +3
Query: 162 LLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATF---SISILQQIATSIR 332
LL+ + GF + IQ ++I P ++ +DV+A A++G+GKT F +I +L ++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 333 E-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 452
+I++PTREL+ Q V+ L + N +GG+N
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSN 179
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 53.6 bits (123), Expect = 6e-08
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = +3
Query: 129 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISIL 308
+TF + NL E + + + G+ K + IQQ A+ Q D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 309 QQI-------ATSIREC--QALILAPTRELAQQI 383
++ C + +IL PTRELA QI
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 53.2 bits (122), Expect = 8e-08
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Frame = +3
Query: 126 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISI 305
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 197
Query: 306 LQQIA------------TSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 440
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 198 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 257
Query: 441 GG 446
GG
Sbjct: 258 GG 259
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 53.2 bits (122), Expect = 8e-08
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Frame = +3
Query: 126 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISI 305
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 181
Query: 306 LQQIA------------TSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 440
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 182 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 241
Query: 441 GG 446
GG
Sbjct: 242 GG 243
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 53.2 bits (122), Expect = 8e-08
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Frame = +3
Query: 126 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISI 305
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 178
Query: 306 LQQIA------------TSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 440
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 179 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 238
Query: 441 GG 446
GG
Sbjct: 239 GG 240
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Frame = +3
Query: 129 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISIL 308
+TF + NL E + + + G+ K + IQQ + Q D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 309 QQI-------ATSIREC--QALILAPTRELAQQI 383
++ C + +IL PTREL QI
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Frame = +3
Query: 129 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISIL 308
+TF + NL E + + + G+ K + IQQ + Q D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 309 QQI-------ATSIREC--QALILAPTRELAQQI 383
++ C + +IL PTREL QI
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Frame = +3
Query: 129 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISIL 308
+TF + NL E + + + G+ K + IQQ + Q D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 309 QQI-------ATSIREC--QALILAPTRELAQQI 383
++ C + +IL PTREL QI
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 50.8 bits (116), Expect = 5e-07
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Frame = +3
Query: 120 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSI 299
Q ++F D ++ + + R + G+ + + IQQ + +D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 300 SILQQIAT-------SIREC--QALILAPTRELAQQI 383
I+ ++ + C + +IL PTRELA QI
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 50.8 bits (116), Expect = 5e-07
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Frame = +3
Query: 120 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSI 299
Q ++F D ++ + + R + G+ + + IQQ + +D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 300 SILQQIAT-------SIREC--QALILAPTRELAQQI 383
I+ ++ + C + +IL PTRELA QI
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 50.4 bits (115), Expect = 6e-07
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Frame = +3
Query: 174 IYAYGFEKPSAIQQRAIMPCIQWR-DVIAQAQSGTGKTATFSISILQQI----------- 317
I+ + F +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 318 ATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 446
+T +R +ALI+APTREL QI K + AL + +GG
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 105
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 49.2 bits (112), Expect = 1e-06
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 17/105 (16%)
Frame = +3
Query: 120 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQW-RDVIAQAQSGTGKTATFS 296
Q + F D++L E + I G+++P+ +Q+ +I P +Q RD+++ AQ+G+GKTA F
Sbjct: 163 QPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTAAFL 221
Query: 297 I----SILQQIATSIREC------------QALILAPTRELAQQI 383
+ +ILQ ++ AL+L+PTREL+ QI
Sbjct: 222 VPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 48.4 bits (110), Expect = 2e-06
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Frame = +3
Query: 123 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSIS 302
++ F D ++ LL + +PS IQ ++I + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 303 ILQQI----------ATSIRECQALILAPTRELAQQ 380
++ +I +++ + A++L PTRELA Q
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 47.2 bits (107), Expect = 6e-06
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Frame = +3
Query: 186 GFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQIATSIRECQ-------- 341
GFEKPS IQ + + +D I +Q+G+GKT F + L I + + +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 342 ---ALILAPTRELAQQIQ 386
L+L+PTRELAQQI+
Sbjct: 163 SPFVLVLSPTRELAQQIE 180
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 47.2 bits (107), Expect = 6e-06
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Frame = +3
Query: 126 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSIS 302
+ +F +M + LL + G P+AIQ + I + RD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 303 IL-----QQIATSIRECQ---ALILAPTRELAQQIQKVVIALGDHL------NAKCHACI 440
++ Q++ + LI+ P+RELA+QI ++I + D L + CI
Sbjct: 248 LVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI 307
Query: 441 GG 446
GG
Sbjct: 308 GG 309
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 45.6 bits (103), Expect = 2e-05
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +3
Query: 132 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATF----SI 299
+F + + L+ I +E+P+ IQ AI + RDV+ A++G+GKTA + +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 300 SILQQIATSIRECQ-ALILAPTRELAQQI 383
I+ Q E A+I+ PTRELA Q+
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 44.4 bits (100), Expect = 4e-05
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Frame = +3
Query: 117 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFS 296
D + ++ + L +L + + IQ I + DV+ QA++ GKTA F
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 297 ISILQQIATSIRECQ----------ALILAPTRELAQQIQKVV 395
+ I+ +I E + ALILAPTRELA QI + +
Sbjct: 437 LPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEAL 479
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 44.4 bits (100), Expect = 4e-05
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Frame = +3
Query: 126 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISI 305
++TF + L ELL ++ ++ + +Q + + DV+ ++ +G+GKT F + +
Sbjct: 10 LKTFRE-KLGPELLE-VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 306 LQQIATSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 446
++ I + + ALIL+P+REL QI V+ + LN GG
Sbjct: 68 MRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGG 117
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 43.6 bits (98), Expect = 7e-05
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Frame = +3
Query: 132 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISIL 308
+FD L ++L + +P+ IQ+ + P + DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 309 QQIATSIRE----------CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 446
++ + + LI+APTREL Q L KC GG
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 43.6 bits (98), Expect = 7e-05
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Frame = +3
Query: 132 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISIL 308
+FD L ++L + +P+ IQ+ + P + DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 309 QQIATSIRE----------CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 446
++ + + LI+APTREL Q L KC GG
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGG 851
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +3
Query: 135 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQ 311
F++ + EL + + + P+A+Q AI + D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.9 bits (74), Expect = 0.056
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 198 PSAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQIATS-IRECQALILAPTRELA 374
PS + P ++ RDV A +G+GKT + + +L + + + QA+IL P + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 375 QQI 383
QI
Sbjct: 202 AQI 204
>U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 3 protein.
Length = 378
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 240 IECMALLHVAG*PTVFQTRKHRFLGAIPPSN-SYHQRFPPLDPSL 109
+ C A+L+ PT+F FLG PPS+ S +Q+ PP+ P++
Sbjct: 50 VVCFAMLY----PTLFHPMLMGFLGRSPPSSPSINQQRPPIHPAM 90
>U00047-12|AAA50685.1| 332|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 9 protein.
Length = 332
Score = 31.5 bits (68), Expect = 0.30
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -3
Query: 440 NACMAFGIQMITKSYHHLLDLLRQLSSWSQD 348
N C+ G++++T Y L D+++ L+ W+ D
Sbjct: 71 NKCLKMGMRIVTNQYDSLDDIIKVLAKWNLD 101
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 31.1 bits (67), Expect = 0.39
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 27 PEDSKNGPSKDQVYDGPPGMEPGGALDTNWDQVVETFDD 143
P++ ++ PS PP PG + D N D+++E+F D
Sbjct: 276 PQEVQSPPSPRPTSVPPPIPSPGPSEDVNMDELIESFSD 314
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 31.1 bits (67), Expect = 0.39
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 27 PEDSKNGPSKDQVYDGPPGMEPGGALDTNWDQVVETFDD 143
P++ ++ PS PP PG + D N D+++E+F D
Sbjct: 276 PQEVQSPPSPRPTSVPPPIPSPGPSEDVNMDELIESFSD 314
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 31.1 bits (67), Expect = 0.39
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 249 VIAQAQSGTGKTATFSISILQQIATSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 428
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 429 H 431
H
Sbjct: 142 H 142
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 186 GFEKPSAIQQRAIMPCIQWRD-VIAQAQSGTGKTATFSISILQQIATSIRECQALILAPT 362
GF+ + IQ + + + VI A +G+GKTA +++L+ + E +A+ + P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 363 RELAQQI 383
++A ++
Sbjct: 1377 EDMATKV 1383
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 249 VIAQAQSGTGKTATFSISILQQIATSIREC 338
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 201 SAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQIATSIRECQALILAPTRELAQ- 377
+A+QQ +I + R ++ +A +G GKT F ++ I +++ Q+ T+
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALKNRQSNCFEYTKPSPSI 173
Query: 378 QIQKVVIALGDHLNAKCHACIG 443
I AL D L +C +G
Sbjct: 174 LIMASTSALVDQLFNRCELILG 195
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 8/44 (18%)
Frame = -2
Query: 174 FLGAIPPSNSYHQRFPP---LDPSLYPMH-----RPAPFQGVHH 67
F+G PP + YH ++PP L P P H P P G +H
Sbjct: 73 FMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPPQSGYYH 116
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 28.3 bits (60), Expect = 2.8
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Frame = +3
Query: 201 SAIQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQ------QIATSIRECQA---LIL 353
+A+QQ++I R ++ A +G GKT F I ++ + T+I + LIL
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILIL 175
Query: 354 APTRELAQQI 383
A T L +Q+
Sbjct: 176 ANTNSLVEQL 185
>Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 204 PTVFQTRKHRFLGAIPPSNSYHQRFPPLDP 115
P + + FLG P N Y FPP+ P
Sbjct: 24 PALLALAQQTFLGFQPQKNMYQHGFPPMLP 53
>U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein.
Length = 494
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 204 PTVFQTRKHRFLGAIPPSNSYHQRFPPLDP 115
P + + FLG P N Y FPP+ P
Sbjct: 24 PALLALAQQTFLGFQPQKNMYQHGFPPMLP 53
>AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 204 PTVFQTRKHRFLGAIPPSNSYHQRFPPLDP 115
P + + FLG P N Y FPP+ P
Sbjct: 24 PALLALAQQTFLGFQPQKNMYQHGFPPMLP 53
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 342 ALILAPTRELAQQIQKVVIALGDHL 416
A+I+APT+EL QI K+ + L L
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQAL 123
>Z78201-2|CAB01588.1| 324|Caenorhabditis elegans Hypothetical
protein ZK836.1 protein.
Length = 324
Score = 26.6 bits (56), Expect = 8.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 9 GRSEDWPEDSKNGPSKDQVYDGPPGME 89
G+ + D + GP+ ++GPPG+E
Sbjct: 241 GQPGEQGPDGEEGPAGKDAFEGPPGVE 267
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 183 KHRFLGAIPPSNSYHQRFPPLDPSLYPMHRP 91
+HR + PP + +HQ PP P L + P
Sbjct: 1603 RHRDNQSAPPRHHHHQPHPPHHPHLQNHYHP 1633
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 183 KHRFLGAIPPSNSYHQRFPPLDPSLYPMHRP 91
+HR + PP + +HQ PP P L + P
Sbjct: 1764 RHRDNQSAPPRHHHHQPHPPHHPHLQNHYHP 1794
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 26.6 bits (56), Expect = 8.4
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +3
Query: 207 IQQRAIMPCIQWRDVIAQAQSGTGKTATFSISILQQIATSIRECQALILAPTRELAQ-QI 383
+QQ +I + R ++ +A +G GKT F ++ I ++ Q+ T+ I
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALENRQSNCFESTKPSPSILI 75
Query: 384 QKVVIALGDHLNAKCHACIG 443
AL D L +C +G
Sbjct: 76 MASTSALVDQLFNRCELILG 95
>U40935-6|AAL02505.1| 102|Caenorhabditis elegans Hypothetical
protein F31E3.2c protein.
Length = 102
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 3 HEGRSEDWPEDSKNGPSKDQVYDGPPGME 89
H GR+E+ +D ++GP+K ++ G P E
Sbjct: 15 HIGRNEENLDDDEDGPAKKRLRIGEPQAE 43
>U40935-5|AAM29686.1| 441|Caenorhabditis elegans Hypothetical
protein F31E3.2a protein.
Length = 441
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 3 HEGRSEDWPEDSKNGPSKDQVYDGPPGME 89
H GR+E+ +D ++GP+K ++ G P E
Sbjct: 15 HIGRNEENLDDDEDGPAKKRLRIGEPQAE 43
>U40935-4|AAM29687.1| 436|Caenorhabditis elegans Hypothetical
protein F31E3.2b protein.
Length = 436
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 3 HEGRSEDWPEDSKNGPSKDQVYDGPPGME 89
H GR+E+ +D ++GP+K ++ G P E
Sbjct: 15 HIGRNEENLDDDEDGPAKKRLRIGEPQAE 43
>AF465981-1|AAL76993.1| 324|Caenorhabditis elegans cuticle collagen
LON-3 protein.
Length = 324
Score = 26.6 bits (56), Expect = 8.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 9 GRSEDWPEDSKNGPSKDQVYDGPPGME 89
G+ + D + GP+ ++GPPG+E
Sbjct: 241 GQPGEQGPDGEEGPAGKDAFEGPPGVE 267
>AF262406-1|AAL08218.1| 324|Caenorhabditis elegans cuticle collagen
protein LON-3 protein.
Length = 324
Score = 26.6 bits (56), Expect = 8.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 9 GRSEDWPEDSKNGPSKDQVYDGPPGME 89
G+ + D + GP+ ++GPPG+E
Sbjct: 241 GQPGEQGPDGEEGPAGKDAFEGPPGVE 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,722,929
Number of Sequences: 27780
Number of extensions: 186105
Number of successful extensions: 711
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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