Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B16
(505 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 31 0.13
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 30 0.17
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.23
SPAC8C9.10c |||ribosome biogenesis protein Rrp14-N|Schizosacchar... 29 0.30
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 29 0.30
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.30
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 29 0.52
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 0.69
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 28 0.92
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.2
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 1.2
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 27 1.6
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 27 1.6
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 27 1.6
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 2.1
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.1
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 26 2.8
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 2.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 2.8
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 26 2.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 3.7
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 3.7
SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr 2||... 26 3.7
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 3.7
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 3.7
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 25 4.9
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 4.9
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 25 6.5
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 6.5
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe... 25 6.5
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 6.5
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 25 6.5
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 8.5
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 8.5
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 25 8.5
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 8.5
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 30.7 bits (66), Expect = 0.13
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +2
Query: 134 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGAL 313
N +Q EK QD + ++ A+ ++ E + ++ +D + EL + A
Sbjct: 95 NARIQPDEKTLQDL---LEQRQVALREAREAEEELQRARQYNDRSTSEALELEARAKKAA 151
Query: 314 TDANGKAKEVLQQARQNLERTVEDLRK-AHPDVEKQASAITREAANRH 454
DA A E ++A+ ++ER+ K A + E+ A+A+ REA +H
Sbjct: 152 QDAE-LASERAREAQSSIERSASLREKQAREEAERAATAL-REAELKH 197
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 30.3 bits (65), Expect = 0.17
Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 18/145 (12%)
Frame = +2
Query: 110 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFNAIVNSKNTESLNKALKEGSDSMV 271
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 272 QQVSELSNSLQGA------------LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEK 415
+QVS L L+ A A K ++ + + E+ V DL + DV
Sbjct: 125 KQVSSLVRFLRFASHNCVHPSDDAPFNSAVEKLLVIVYEGTEKSEKAVADLNDSSTDVVP 184
Query: 416 QASAITREAANRHPEHTKGEPEPGE 490
+ S ++ + + ++ P P E
Sbjct: 185 E-SEVSFQTISSRVDNFFAAPLPSE 208
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.9 bits (64), Expect = 0.23
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +2
Query: 149 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 328
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+ A
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATN 1393
Query: 329 KAKEVLQQARQNLERTVEDLRK 394
K K L Q + R ED+ K
Sbjct: 1394 KLKNQLDHLNQEI-RLKEDVLK 1414
>SPAC8C9.10c |||ribosome biogenesis protein
Rrp14-N|Schizosaccharomyces pombe|chr 1|||Manual
Length = 154
Score = 29.5 bits (63), Expect = 0.30
Identities = 18/91 (19%), Positives = 40/91 (43%)
Frame = +2
Query: 230 SLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDV 409
SL+ + + D + +S TD + + E + Q R L ++DLR+
Sbjct: 55 SLDGLVNDADDDSQKSSKWEQSSTMSDDTDVSDRHAESMSQIRGKLASKIQDLRE----- 109
Query: 410 EKQASAITREAANRHPEHTKGEPEPGEGSRR 502
+++A + ++ N+ P + + + G G +
Sbjct: 110 KRKAGDLNQKRQNKRPVENEKDSQKGSGKSK 140
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 29.5 bits (63), Expect = 0.30
Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 1/107 (0%)
Frame = +2
Query: 155 EKHAQDFQKT-ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGK 331
E+H Q K + +Q + + S+N +N L ++ + + G + +
Sbjct: 434 EEHRQKIVKERLEKQRASKIRSQNRPKVNAGLASRLSYQENKLRKKTGVTDGPSILEDER 493
Query: 332 AKEVLQQARQNLERTVEDLRKAHPDVEKQASAITREAANRHPEHTKG 472
K V ++ + ++ HP + E + EHTKG
Sbjct: 494 FKNVFTDKEFEVDEDTLEYKQLHPSRSEARGLTAAEESEEEKEHTKG 540
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.30
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 344 LQQARQNLERTVEDLRKAHPDVEK 415
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 28.7 bits (61), Expect = 0.52
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Frame = +2
Query: 218 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERTV 379
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERTQ 423
Query: 380 EDLRKAHPDVEKQASAITREAANRHPEHTKGEPEP 484
+ A + A E + E T E +P
Sbjct: 424 REGNYARASELQYAIIPELERSVPKEEKTLEEKKP 458
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 28.3 bits (60), Expect = 0.69
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 170 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVL 346
D T Q + I+ ++ +ES + A SM + S+S A NG+AKE
Sbjct: 426 DLNDTTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETP 483
Query: 347 QQARQNLERTVED 385
++ R ++T ED
Sbjct: 484 EEKRARKKKTKED 496
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.9 bits (59), Expect = 0.92
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +2
Query: 209 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 388
+N S++ L + D + S + NG A+E+ A + L VE+L
Sbjct: 29 LNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCVEEL 85
Query: 389 RKAHPDVEKQ 418
RKA D+E++
Sbjct: 86 RKARLDLEEE 95
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 363 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 244
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 1.2
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 128 APNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 304
A + +++ HA+ + T + V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 159 ATDICVKETALHARHWYNTYI--ISEAVKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 1.6
Identities = 26/123 (21%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Frame = +2
Query: 134 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQV------SELSN 295
N++++ + + Q+ + + + N+ NS+ S++ A +GS + +++ S +
Sbjct: 131 NSVVEKISQKNQEARSRANSRVNSRANSRANSSVSLAGMDGSPNWKRKMKSAVFGSRVKL 190
Query: 296 SLQGALTDANGKAKEVLQQA--RQNLERTVEDLR-----KAHPDVEKQASAITRE-AANR 451
+ + A N + + +QA R + +++ R + P ++++SAIT E A N
Sbjct: 191 NDEEAQLPRNKSSVSIAEQAASRPKVSFSLQSSRQPSIAEEQPQTQRKSSAITVEHAENA 250
Query: 452 HPE 460
PE
Sbjct: 251 EPE 253
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 1.6
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Frame = +2
Query: 188 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD------ANGKAKEV-- 343
+EQF+ + + N + + G + + ++++ N +G + A K KE+
Sbjct: 189 NEQFSRALEALNDFVVPPLYEGGPSTRLSLITDVEN--EGLYREWQTSRYARNKQKEINI 246
Query: 344 LQQARQNLERTVEDLRKAHPDVEKQASAITREAANRH 454
LQQ R NLER +D+ + DV + R+A ++
Sbjct: 247 LQQIRFNLERICQDI--GNFDVRSRIERAARQAREKN 281
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 27.1 bits (57), Expect = 1.6
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +2
Query: 239 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP----D 406
+ ++E S++ + SE+S + A+TD + KE+ A ++ + +KA P
Sbjct: 30 REIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATPAAVAP 88
Query: 407 VEKQASAITREAANRHPEHTKGEPEPGEGSR 499
VE ++ T EA + + +P + R
Sbjct: 89 VEATSAVDTSEAVASMTPNKRKARDPAQPKR 119
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 2.1
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 185 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 355
I +Q N +I N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 2.1
Identities = 18/86 (20%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +2
Query: 224 TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN----LERTVEDLR 391
TE+ + L + + ++ +++++L N+ Q + + K + + LE+T+EDL+
Sbjct: 875 TETKHDILAQRNRNVSEKMNDLENAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLK 934
Query: 392 KAHPDVEKQASAITREAANRHPEHTK 469
A D K + + + ++ + + TK
Sbjct: 935 LALQDELKNRNLLMDDISSYNKQTTK 960
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 26.2 bits (55), Expect = 2.8
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +2
Query: 188 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 367
S+ FN + S +N + S++Q + N+ + L+ + K E +Q +
Sbjct: 328 SKNFNGVFESSYQPLINDL--DHQISVMQNDEKRINNAKTELSLSLEKKLEAKKQKEKVY 385
Query: 368 ERTVEDLRKAHPDV-EKQASAITREAANR 451
+ +++L V EK+ + TREAAN+
Sbjct: 386 KDKLDELANLETMVLEKKKAVATREAANK 414
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 2.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 338 EVLQQARQNLERTVEDLRKAHPDVEKQASAITREAANRHPEHT 466
E+++Q +N RTVEDL A ++ T+ + HP ++
Sbjct: 793 ELIRQKPEN-SRTVEDLNFAMQQLDASIETFTKLVSVEHPPYS 834
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 2.8
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 245 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEK 415
+ + S++ V + E + L L+ K+ L++ +Q L EDLRK D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 416 Q 418
+
Sbjct: 1065 E 1065
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 26.2 bits (55), Expect = 2.8
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 128 APNTILQDLEKHAQD 172
APNTIL+DL +H +D
Sbjct: 227 APNTILEDLMRHDKD 241
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 3.7
Identities = 31/124 (25%), Positives = 44/124 (35%), Gaps = 1/124 (0%)
Frame = +2
Query: 104 HGAMVRRDAPNTILQDLEKHAQDFQKTISE-QFNAIVNSKNTESLNKALKEGSDSMVQQV 280
HG +P LQ H + Q T++ NA V S ++ S V
Sbjct: 1719 HGVGAEMASPYQPLQPASAHLPNLQPTLAPINQNAYVPSNIAPAMGAMQSAPSAEAVAAP 1778
Query: 281 SELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQASAITREAANRHPE 460
SE N K+ QQA+Q + V DL + + EKQ + A +
Sbjct: 1779 SESLNL-----------NKDRSQQAKQAAAQNVADLVRQEEEKEKQKQKAKKNAESGKKG 1827
Query: 461 HTKG 472
KG
Sbjct: 1828 GAKG 1831
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 3.7
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 143 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 322
L+DLE+H D K I I ++ ++ K +E D +++ + +S++ +T+
Sbjct: 85 LEDLERHVDDCNKRID-----IAEARREKT--KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 323 NGKAKEVL 346
AK L
Sbjct: 138 EALAKRKL 145
>SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 3.7
Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Frame = +2
Query: 137 TILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSN---SLQG 307
T+ D Q+ I + +++ + + SL + +K + Q N SLQ
Sbjct: 72 TLFDDRPVEIQELTFQIKQSLSSL--NSDIASLQQVVKGNRNKPAQMNQHSENVVVSLQN 129
Query: 308 ALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQASAITREAANRHPEHTKGEPEP 484
+L + + K++L+ QN++ + K A+ + + P +P+P
Sbjct: 130 SLANTSMTFKDILEIRTQNMKASQNRTEKFVASSSMNANPLINSGNSISPFADYNDPKP 188
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 3.7
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +2
Query: 227 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 406
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTL 879
Query: 407 VEKQASAIT 433
V + S IT
Sbjct: 880 VLQLQSNIT 888
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 311 LTDANGKAKEVLQQARQN 364
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.4 bits (53), Expect = 4.9
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +2
Query: 329 KAKEVLQ---QARQNLERTVEDLRKAHPDVEKQASAITREAANR 451
K KE ++ Q ++ LER VE+LRK +++K + EA R
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRK---ELDKYKDLVETEAEKR 168
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.4 bits (53), Expect = 4.9
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 134 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 301
NT+ + + K +Q FQ S +FN + N ++K+L++ + S+ N L
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQNCAKLDFDDSKSKNLL 538
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 6.5
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +2
Query: 137 TILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT 316
TIL L + Q F+K I+ SKN +S +L + D + + +L +
Sbjct: 343 TILSSLSRSCQKFRKKIAFTLFVGKQSKNDDSDFSSLCQRLDEISASCNNDYTTLLYQIR 402
Query: 317 DANGKAKEVLQQARQNLERTVEDLRK 394
E + + LE +E LRK
Sbjct: 403 TFGYAVDEKHFKTNERLECLLEKLRK 428
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 6.5
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -2
Query: 384 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 235
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 513
Score = 25.0 bits (52), Expect = 6.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 492 PSPGSGSPLVCSGWRFAASRVIALACFSTSGCALRRSSTVRSK 364
PS SGSP V + + + + C S S A+ RSS + +K
Sbjct: 300 PSAVSGSPQVLNYFTAPNVLIWSAVCSSNSWAAIYRSSPLLAK 342
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 6.5
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 179 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 298
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 25.0 bits (52), Expect = 6.5
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Frame = +2
Query: 110 AMVRRDAPNTILQDLEKHAQDFQKTISEQFNA--IVNSKNTESLNKALKEGSDSMVQQVS 283
+M R A + +K + D T S+Q +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 284 E-LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQASAITR 436
+ NSL +L+ ++ +R NL+ + A D + A ++R
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSRWDNTADNDSQIDAQDLSR 183
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 24.6 bits (51), Expect = 8.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -2
Query: 222 FFELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTIAP 106
+ E+T N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 24.6 bits (51), Expect = 8.5
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +2
Query: 233 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 412
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 413 KQASAITREAANRHPE 460
++A +++ P+
Sbjct: 64 QEAVRCVAIISSKIPQ 79
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 24.6 bits (51), Expect = 8.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 219 FELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTI 112
+++++ L L + WKSW S S ++L +S R +
Sbjct: 139 YQISVVLLLCLTMGWKSWT--SASGAVILSSSTRML 172
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 8.5
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +1
Query: 346 PTSSP--ELGAHSRGSPQG 396
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,839,061
Number of Sequences: 5004
Number of extensions: 32875
Number of successful extensions: 216
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 200198394
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -