Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B16
         (505 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   0.78 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   3.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.6  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 221 NTESLNKALKEGSDSMVQQVSELSNS 298
           NTESL K+  +G+D   ++V ++ +S
Sbjct: 278 NTESLMKSENQGNDVQYERVQDVFDS 303


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 405 SGCALRRSSTVRSKFWRACWSTSLALPFASVNAPCRLLD 289
           +GC L   +  ++K+ RAC + SL L   +     R+LD
Sbjct: 366 AGCDLTIDNLRKAKYLRACITESLRL-IPTTTCIARILD 403


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 253 RLRLHGAAGLRVIQQS 300
           RL++HG  GLRV   S
Sbjct: 564 RLKVHGIRGLRVADAS 579


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 457 WMAVCSFSCNCAGLFLDVGVRLAEILDCALQVLAS 353
           W A+      C  LF +V V LA + + ALQ + +
Sbjct: 188 WWALILVIVPCLTLFGNVLVILAVVRERALQTVTN 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,283
Number of Sequences: 438
Number of extensions: 2106
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)