Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_B14
(263 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0109 - 22454539-22456268,22457069-22457279 93 2e-20
03_02_0546 - 9381989-9383733,9385838-9386054 93 2e-20
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 92 5e-20
03_06_0484 + 34233042-34233258,34235317-34237049 92 6e-20
03_02_0540 + 9340379-9340592,9341250-9342988 91 8e-20
11_08_0075 + 28173220-28173433,28175348-28177083 90 2e-19
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 84 1e-17
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 82 7e-17
03_02_0542 - 9348126-9349585,9352433-9352655 77 3e-15
08_01_0654 - 5639419-5641449 76 3e-15
05_04_0392 - 20889699-20891726 75 1e-14
05_04_0052 - 17515344-17517353 73 2e-14
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 70 3e-13
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 67 2e-12
11_01_0564 - 4447078-4448519,4449465-4449711 66 3e-12
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 61 1e-10
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 50 3e-07
12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231 48 8e-07
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 47 2e-06
03_02_0180 - 6211823-6213559 34 0.018
06_03_1241 + 28615175-28615828 31 0.17
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 31 0.17
07_01_0245 - 1803170-1803887,1803971-1804641 29 0.39
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 29 0.68
08_02_0903 + 22438406-22438614,22439640-22440366,22440494-224406... 27 1.6
08_02_0748 - 20754293-20755136,20755686-20755927,20756012-207562... 27 1.6
03_05_0834 - 28051067-28051381,28051675-28052120,28052330-280526... 27 1.6
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140... 27 2.7
02_05_1138 + 34379697-34380902 27 2.7
02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856 27 2.7
07_03_1405 + 26340645-26340921,26341003-26341226,26341315-263415... 26 3.6
05_06_0285 + 26922967-26923051,26923258-26923362,26924044-269240... 25 6.3
09_04_0047 - 14139706-14140140,14140234-14140636,14141028-141412... 25 8.3
08_02_1139 - 24638824-24639325,24639528-24639713,24639801-246405... 25 8.3
06_03_0709 - 23759162-23759455,23759681-23759761,23759847-237599... 25 8.3
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085... 25 8.3
02_01_0755 + 5604554-5604608,5604706-5604734,5606558-5606641,560... 25 8.3
01_05_0769 - 25042022-25042447,25042856-25043234,25043714-250437... 25 8.3
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 93.5 bits (222), Expect = 2e-20
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +1
Query: 112 KAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
+ PA GIDLGTTYSCVGV+QH +VEIIANDQGNRTT SYVAFTDTERLIG
Sbjct: 5 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIG 54
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 93.5 bits (222), Expect = 2e-20
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +1
Query: 112 KAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
+ PA GIDLGTTYSCVGV+QH +VEIIANDQGNRTT SYVAFTDTERLIG
Sbjct: 7 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIG 56
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 92.3 bits (219), Expect = 5e-20
Identities = 45/55 (81%), Positives = 49/55 (89%), Gaps = 2/55 (3%)
Frame = +1
Query: 103 KMAKA--PADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
+MAK PA GIDLGTTYSCVGV+QH +VEIIANDQGNRTT SYVAFTD+ERLIG
Sbjct: 193 EMAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIG 247
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 91.9 bits (218), Expect = 6e-20
Identities = 42/50 (84%), Positives = 45/50 (90%)
Frame = +1
Query: 112 KAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
+ PA GIDLGTTYSCVGV+QH +VEIIANDQGNRTT SYV FTDTERLIG
Sbjct: 7 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIG 56
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 91.5 bits (217), Expect = 8e-20
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +1
Query: 118 PADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
PA GIDLGTTYSCVGV+QH +VEIIANDQGNRTT SYVAFTD+ERLIG
Sbjct: 8 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIG 55
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 90.2 bits (214), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +1
Query: 112 KAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
+ PA GIDLGTTYSCVGV+QH +VEIIANDQGNRTT SYV FTD+ERLIG
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIG 55
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 84.2 bits (199), Expect = 1e-17
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = +1
Query: 94 KRNKMAKAPADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
K + K P GIDLGTTYSCVGV+++G V+I+ANDQGNR T S+VAFTD ERL+G
Sbjct: 30 KGGRKTKGPVIGIDLGTTYSCVGVYRNGHVDIVANDQGNRITPSWVAFTDDERLVG 85
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 81.8 bits (193), Expect = 7e-17
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
GIDLGTTYSCVGV+++G VEIIANDQGNR T S+VAFTD+ERLIG
Sbjct: 37 GIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIG 81
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 76.6 bits (180), Expect = 3e-15
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +1
Query: 118 PADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
PA GIDLGTTYSCV V++ G+VE+I NDQGN TT S VAFTDT RLIG
Sbjct: 11 PAVGIDLGTTYSCVAVWRRGRVEVIPNDQGNLTTPSCVAFTDTWRLIG 58
>08_01_0654 - 5639419-5641449
Length = 676
Score = 76.2 bits (179), Expect = 3e-15
Identities = 37/46 (80%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTD-TERLIG 261
GIDLGTTYSCVGV+++G VEIIANDQGNR T S+VAFTD ERLIG
Sbjct: 48 GIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTDGGERLIG 93
>05_04_0392 - 20889699-20891726
Length = 675
Score = 74.5 bits (175), Expect = 1e-14
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTD-TERLIG 261
GIDLGTTYSCVGV+++ +VEIIANDQGNR T S+VAFTD ERLIG
Sbjct: 48 GIDLGTTYSCVGVYRNDRVEIIANDQGNRITPSWVAFTDGGERLIG 93
>05_04_0052 - 17515344-17517353
Length = 669
Score = 73.3 bits (172), Expect = 2e-14
Identities = 36/46 (78%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFT-DTERLIG 261
GIDLGTTYSCVGV+++G VEIIANDQGNR T S+VAFT ERLIG
Sbjct: 43 GIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTGGGERLIG 88
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 69.7 bits (163), Expect = 3e-13
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +1
Query: 118 PADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
P GIDLGT SCV V+Q+G+ EI+ N+ G R T SY AFTDTERL+G
Sbjct: 10 PVIGIDLGTACSCVAVWQNGRAEIVTNEHGGRATPSYAAFTDTERLVG 57
>11_01_0563 +
4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 66.9 bits (156), Expect = 2e-12
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = +1
Query: 118 PADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
PA GIDLGTTYSC V +H + E+I NDQGNR T S VAFT +R +G
Sbjct: 642 PAIGIDLGTTYSCAAVRRHNRSEVITNDQGNRITPSCVAFTADDRFVG 689
Score = 62.9 bits (146), Expect = 3e-11
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = +1
Query: 118 PADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
PA GIDLGTTYSCV V + + E I NDQGNR T S VAFT +R +G
Sbjct: 16 PAIGIDLGTTYSCVAVRRRYRSEAITNDQGNRITPSCVAFTAADRFVG 63
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 66.5 bits (155), Expect = 3e-12
Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Frame = +1
Query: 118 PADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFT--DTERLIG 261
PA GIDLGTTYSCV V++H + E+IANDQGNR T S VAFT D + +G
Sbjct: 17 PAVGIDLGTTYSCVAVWRHDRGEVIANDQGNRLTPSCVAFTADDDDSFVG 66
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 61.3 bits (142), Expect = 1e-10
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTD 243
GID+G TYSCV V+ G+VEII NDQG+R T S+VAFTD
Sbjct: 38 GIDIGATYSCVAVYCKGRVEIIPNDQGSRLTPSWVAFTD 76
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 49.6 bits (113), Expect = 3e-07
Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDT-ERLIG 261
GIDLGTT SCV V + ++I N +G RTT S VAF ERL+G
Sbjct: 56 GIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGERLVG 101
>12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231
Length = 270
Score = 48.4 bits (110), Expect = 8e-07
Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFT-DTERLIG 261
GIDLGTT S V + GK +I N +G RTT S VA+T ERL+G
Sbjct: 55 GIDLGTTNSAVAAMEGGKPTVITNAEGQRTTPSVVAYTKGGERLVG 100
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 47.2 bits (107), Expect = 2e-06
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +1
Query: 91 YKRNKMAKAPAD---GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDT-ERLI 258
+ R AKA + GIDLGTT SCV V + ++I N +G RTT S VAF E L+
Sbjct: 21 FARTFSAKATGNEVIGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLV 80
Query: 259 G 261
G
Sbjct: 81 G 81
>03_02_0180 - 6211823-6213559
Length = 578
Score = 33.9 bits (74), Expect = 0.018
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 121 ADGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTD 243
A GID+GT+ V V+ +VE++ N + + SYV F D
Sbjct: 28 AIGIDIGTSNCSVAVWTGHQVELLKNTRNQKGMRSYVMFKD 68
>06_03_1241 + 28615175-28615828
Length = 217
Score = 30.7 bits (66), Expect = 0.17
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = -3
Query: 204 LVIGDDLNFPML---EHTHTRVGCAQIDTICWCFGHF 103
LV GDDL L E THTR+ A +D I W F
Sbjct: 119 LVEGDDLTLVRLLRCESTHTRIPPAMLDDILWLLDSF 155
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 30.7 bits (66), Expect = 0.17
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 175 GKVEIIANDQGNRTTHSYVAFTDT-ERLIG 261
GK I+ N +G RTT S VA+T + +RL+G
Sbjct: 4 GKPTIVTNAEGARTTPSVVAYTKSGDRLVG 33
>07_01_0245 - 1803170-1803887,1803971-1804641
Length = 462
Score = 29.5 bits (63), Expect = 0.39
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 140 PRSIPSAGALAILFLLYLIDNQSLTARRTNSASKGARLTLV 18
P P+ GALA F L D LTA+ + S+ ARL +V
Sbjct: 68 PAPAPATGALAAAFHLSKADLDRLTAKPSLFGSRTARLKIV 108
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 28.7 bits (61), Expect = 0.68
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTERLIG 261
G D+G + ++++ N + NR + + VAF+ RL+G
Sbjct: 5 GFDVGNDTLVAAAARQRGIDVLLNAESNRESPAAVAFSHNARLLG 49
>08_02_0903 +
22438406-22438614,22439640-22440366,22440494-22440679,
22441310-22441770,22441869-22442027,22442098-22442449,
22442563-22442842,22443330-22443661
Length = 901
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 122 QMVSIWAQPTLVWVCSSMGKLRSS 193
QMV WA+ L W C +M K RSS
Sbjct: 632 QMVE-WARWVLTWQCEAMSKERSS 654
>08_02_0748 -
20754293-20755136,20755686-20755927,20756012-20756241,
20756324-20756612
Length = 534
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 215 VLLPWSLAMISTFPCWNTPTQE*VVP---RSIPSAGALAILFLLYLIDNQSL 69
+LL W++ +++T P W + V PS +L L +L ++ N++L
Sbjct: 346 LLLTWAIMLLATHPAWQDKARAEVAAVCGGGAPSPDSLPKLAVLQMVINETL 397
>03_05_0834 -
28051067-28051381,28051675-28052120,28052330-28052671,
28053170-28053310,28053419-28053489,28053575-28053640,
28053874-28054017,28054149-28054207,28054246-28054369,
28054730-28054862,28055138-28055187,28055715-28055824,
28057355-28057436,28057536-28057705,28057812-28058498,
28058645-28058794,28058908-28059039,28059444-28059594,
28060253-28060344,28062478-28062585
Length = 1190
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 127 GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTD 243
GI LGT +G+ G V I+ N G R +H F D
Sbjct: 785 GIVLGTVVGAIGILIIGAVFIVCN--GRRKSHLREVFVD 821
>03_06_0572 +
34812203-34812278,34812485-34813768,34813973-34814049,
34814299-34814646
Length = 594
Score = 26.6 bits (56), Expect = 2.7
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = -1
Query: 248 SVSVNATYECVVLLPWSLAMISTFPCWNTPTQE*VVPRSIPSAGALAILFLLYLIDNQSL 69
SV+ + C++LL + +++ C Q ++ S+ S LFL +S
Sbjct: 6 SVAFTIFFSCILLLETISSSVASLDCSYGSAQVKILSSSVVSEQQNVYLFLKPFQSTRSC 65
Query: 68 TARRTNSASKGARLTLVPN 12
+ARR A + +VPN
Sbjct: 66 SARRL--AGEFVNGVVVPN 82
>02_05_1138 + 34379697-34380902
Length = 401
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 133 DLGTT-YSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTE 249
D+ T Y CVGV HG+ ++ + ++ S A D E
Sbjct: 178 DMSTRRYKCVGVTWHGRFHVVGGFAESTSSSSPAAAADDE 217
>02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856
Length = 299
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 142 TTYSCVGVFQHGKVEIIANDQGNRTTHSYVAFTDTE 249
TT + V V Q ++ IAN+QGNR S+ F T+
Sbjct: 208 TTLAGVMVTQTQLLQAIANNQGNRGGSSFGEFVRTK 243
>07_03_1405 +
26340645-26340921,26341003-26341226,26341315-26341562,
26341622-26342051,26342630-26343049
Length = 532
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 212 LLPWSLAMISTFPCWNTPTQE*VVPRSIPSAGA 114
LL W++ ++ST P W +E V R AGA
Sbjct: 344 LLSWTMFLLSTHPDWQDKLREEAV-RECAGAGA 375
>05_06_0285 +
26922967-26923051,26923258-26923362,26924044-26924072,
26925078-26925224,26926402-26926632
Length = 198
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 189 DLNFPMLEHTHTRVGCAQ 136
D++ PM+E +H R+G A+
Sbjct: 96 DVDHPMIERSHMRIGLAE 113
>09_04_0047 -
14139706-14140140,14140234-14140636,14141028-14141272,
14141341-14141576,14141651-14141939
Length = 535
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 215 VLLPWSLAMISTFPCWNTPTQE*VVP---RSIPSAGALAILFLLYLIDNQSL 69
+LL W++ +++T P W + V PSA L+ L +L +I ++L
Sbjct: 349 LLLTWAIMLLATNPAWQEKARTEVAAVCGDHPPSADHLSKLTVLQMIIQETL 400
>08_02_1139 -
24638824-24639325,24639528-24639713,24639801-24640543,
24640709-24640870,24641141-24641500
Length = 650
Score = 25.0 bits (52), Expect = 8.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 81 INKIQKKQNGQSTSRWYRSGHN 146
+ K+++ Q+GQ T Y+ HN
Sbjct: 285 VKKVERSQDGQITEIVYKGSHN 306
>06_03_0709 -
23759162-23759455,23759681-23759761,23759847-23759948,
23760068-23760163,23760256-23760315,23760496-23760549,
23760657-23760695,23761102-23761179,23761476-23761529,
23761797-23761880,23763447-23763475,23763602-23763659
Length = 342
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 192 DDLNFPMLEHTHTRVGCAQIDTICW 118
DDLN+P T+ V I + CW
Sbjct: 193 DDLNYPEKAETYYIVNAPYIFSACW 217
>04_04_1263 - 32207636-32207938,32208020-32208170,32208263-32208500,
32208604-32208814,32208927-32209108,32209196-32209297,
32210002-32211187,32212103-32212499,32212551-32212582,
32212885-32213157,32213307-32213394,32213486-32213723,
32213824-32214034,32214119-32214300,32214378-32214479,
32214801-32216224,32216751-32216822,32217688-32217719,
32218186-32218263,32218425-32218512,32218608-32218845,
32219060-32219162,32219386-32219558,32219644-32219745,
32219825-32220606,32220659-32221012,32224055-32224140,
32224250-32224400,32224534-32224771,32224876-32225119,
32225190-32225368,32225577-32225675,32225835-32227083
Length = 3195
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 152 LVWVCSSMGKLRS 190
LVW+C S GK RS
Sbjct: 2827 LVWICKSRGKQRS 2839
>02_01_0755 +
5604554-5604608,5604706-5604734,5606558-5606641,
5606728-5606781,5606958-5607035,5607753-5607806,
5608060-5608119,5608202-5608297,5608403-5608504,
5608614-5608673,5608819-5609109
Length = 320
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 228 VRVRSSVALVIGDDLNFPMLEHTHTRVGCAQIDTICW 118
+++ +S++ V DDLN+P T+ V I + CW
Sbjct: 169 MKMLTSISTV--DDLNYPEKTETYYVVNVPYIFSACW 203
>01_05_0769 -
25042022-25042447,25042856-25043234,25043714-25043763,
25044222-25044442,25045085-25045385
Length = 458
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -1
Query: 215 VLLPWSLAMISTFPCWNTPTQE*VV---PRSIPSAGALAILFLLYLI 84
VLL W+L ++S P W +E V+ R+ P +L+ L ++ +I
Sbjct: 275 VLLTWTLIVLSMHPEWQERAREEVLHHFGRTTPDYDSLSRLKIVTMI 321
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,093,131
Number of Sequences: 37544
Number of extensions: 127570
Number of successful extensions: 383
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 14,793,348
effective HSP length: 66
effective length of database: 12,315,444
effective search space used: 258624324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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