Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_B14
         (263 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    29   0.038
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    24   1.1  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   1.4  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   2.5  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    21   5.7  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    21   7.6  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 28.7 bits (61), Expect = 0.038
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -1

Query: 236 NATYECVVLLPWSLAMISTFPCWNTPTQE*VVPRSIPSAGALA 108
           N  ++C V   WS+A   T  C  T   E V+ RS PS+  LA
Sbjct: 18  NPCWDCTV---WSMASNRTVRCPRTRRSEAVMTRSTPSSPRLA 57


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 18  HEGQSRTFTC*VRPTSCQRLIINKIQKKQNGQSTSRW 128
           H+    ++ C + PTS        IQ K NG++   W
Sbjct: 6   HKNGGCSYICLLNPTSYSCACPIGIQLKDNGKTCKSW 42


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 1   WLLEFGTRVNRAPLLAEFVLRAVND*LSIRYKRNKMAKAPADGIDLGTTYSCV 159
           W L  GT+  R  L A+   + V   L++    + + +APA  +     Y C+
Sbjct: 316 WQLSDGTKRARVRLPAKAAKQLVGQKLTVSCCISNIKEAPAINLQQQRCYRCL 368


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -2

Query: 151 SRLCPDRYHLLVLWPFCFFCILLIISR*QLVGRTQQVKVR 32
           S LC DR H++VL       +  +++   LV  T +++++
Sbjct: 834 SDLCVDRTHMIVLTCVIVSVVACLVAALSLVYYTYKLELK 873


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 178 SHAGTHPHKSRLC 140
           +H GT PH+ + C
Sbjct: 176 THTGTKPHRCKHC 188


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 22  RVNRAPLLAEFVLRAVND*LSIRYKR 99
           RVN  P +   + R+ N  ++I Y+R
Sbjct: 547 RVNLTPGINNIIRRSANSSVTIPYER 572


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,110
Number of Sequences: 2352
Number of extensions: 4955
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 14420043
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)